STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN85315600Conserved hypothetical protein. (495 aa)    
Predicted Functional Partners:
uxaC
Uronate isomerase/glucuronate isomerase.
 
  
 0.926
uxaB
Altronate oxidoreductase.
    
  0.906
BN85315560
Conserved hypothetical protein (DUF2088).
 
     0.865
BN85315590
Conserved hypothetical protein.
 
     0.818
gnd
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
       0.750
BN85315570
D-mannonate oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.731
BN85315540
Hypothetical protein.
 
     0.708
BN85315550
Conserved hypothetical protein.
       0.660
BN85307950
ABC transporter (sugar), periplasmic component.
  
     0.454
BN85315610
HAD hydrolase, IIB family.
       0.445
Your Current Organism:
Acholeplasma brassicae
NCBI taxonomy Id: 61635
Other names: A. brassicae, ATCC 49388, strain 0502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.