STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdtAMultidrug transporter subunit MdtA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (409 aa)    
Predicted Functional Partners:
mdtB
Multidrug transporter subunit MdtB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MdtB subfamily.
 
 
 0.996
mdtC
Multidrug transporter subunit MdtC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MdtC subfamily.
 
 
 0.995
ANG93441.1
Two-component system sensor histidine kinase BaeA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.949
macB
Macrolide ABC transporter permease/ATP-binding protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.944
ANG92515.1
ATP-independent periplasmic protein-refolding chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.898
ANG93240.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.861
mdtD
Multidrug transporter subunit MdtD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.837
ANG93442.1
Two-component system response regulator BaeR; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.832
ANG93689.1
Aminoglycoside/multidrug transporter subunit AcrD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.824
ANG92748.1
Multidrug efflux RND transporter permease subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.797
Your Current Organism:
Lelliottia amnigena
NCBI taxonomy Id: 61646
Other names: ATCC 33072, CCUG 14182, CIP 103169, CUETM 77-118, DSM 4486, Enterobacter amnigenus, Enterobacter amunigenu, Enterobacter amunigenus, L. amnigena, LMG 2784, LMG:2784, NBRC 105700, NCTC 12124
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.