STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL10786.1gpN; N protein; structural capsid protein; bacteriophage P2-like virions include a head and a tail; N is the major head protein; the mature capsid contains mainly the processed form of the protein N*, which lacks 31 amino acids at the N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)    
Predicted Functional Partners:
AKL10785.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.997
AKL10787.1
precorrin-8W decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.996
AKL10784.1
Tail protein X; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.993
AKL10776.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.989
AKL10777.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.989
AKL10778.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.989
AKL10768.1
Gene D protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.987
AKL10769.1
Tail assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.987
AKL15207.1
Replication protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.985
AKL15206.1
Head completion/stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.979
Your Current Organism:
Kluyvera intermedia
NCBI taxonomy Id: 61648
Other names: ATCC 33110, CCUG 14183, CIP 79.27, CUETM 77-130, DSM 4581, Enterobacter intermedium, Enterobacter intermedius, Enterobacter intrermedium, K. intermedia, Kluyvera cochleae, LMG 2785, LMG:2785, NBRC 102594, NCTC 12125, strain Gavini E 86
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