Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKL11479.1 | AKL11480.1 | AB182_09280 | AB182_09285 | Curli production assembly/transport protein CsgG; Involved in the stability of the curlin proteins during assembly; involved in the secretion of the major curlin subunit CsgA across the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. | Curli assembly protein CsgF; Nucleator protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli secretion and assembly protein complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| AKL11479.1 | AKL11481.1 | AB182_09280 | AB182_09290 | Curli production assembly/transport protein CsgG; Involved in the stability of the curlin proteins during assembly; involved in the secretion of the major curlin subunit CsgA across the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. | Curli assembly protein CsgE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.984 |
| AKL11479.1 | AKL15140.1 | AB182_09280 | AB182_29405 | Curli production assembly/transport protein CsgG; Involved in the stability of the curlin proteins during assembly; involved in the secretion of the major curlin subunit CsgA across the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydrogenase 2-specific chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.414 |
| AKL11479.1 | AKL15254.1 | AB182_09280 | AB182_09295 | Curli production assembly/transport protein CsgG; Involved in the stability of the curlin proteins during assembly; involved in the secretion of the major curlin subunit CsgA across the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Activates the csgBA and csgDEFG operons involved in biofilm formation; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.902 |
| AKL11479.1 | csgB | AB182_09280 | AB182_09300 | Curli production assembly/transport protein CsgG; Involved in the stability of the curlin proteins during assembly; involved in the secretion of the major curlin subunit CsgA across the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. | Curlin minor subunit CsgB; CsgB; functions as a nucleator in the assembly of curli (coiled surface structures) on the cell surface; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.834 |
| AKL11480.1 | AKL11479.1 | AB182_09285 | AB182_09280 | Curli assembly protein CsgF; Nucleator protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli secretion and assembly protein complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | Curli production assembly/transport protein CsgG; Involved in the stability of the curlin proteins during assembly; involved in the secretion of the major curlin subunit CsgA across the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| AKL11480.1 | AKL11481.1 | AB182_09285 | AB182_09290 | Curli assembly protein CsgF; Nucleator protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli secretion and assembly protein complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | Curli assembly protein CsgE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.990 |
| AKL11480.1 | AKL15140.1 | AB182_09285 | AB182_29405 | Curli assembly protein CsgF; Nucleator protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli secretion and assembly protein complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydrogenase 2-specific chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.580 |
| AKL11480.1 | AKL15254.1 | AB182_09285 | AB182_09295 | Curli assembly protein CsgF; Nucleator protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli secretion and assembly protein complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Activates the csgBA and csgDEFG operons involved in biofilm formation; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.977 |
| AKL11480.1 | csgB | AB182_09285 | AB182_09300 | Curli assembly protein CsgF; Nucleator protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli secretion and assembly protein complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | Curlin minor subunit CsgB; CsgB; functions as a nucleator in the assembly of curli (coiled surface structures) on the cell surface; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.833 |
| AKL11481.1 | AKL11479.1 | AB182_09290 | AB182_09280 | Curli assembly protein CsgE; Derived by automated computational analysis using gene prediction method: Protein Homology. | Curli production assembly/transport protein CsgG; Involved in the stability of the curlin proteins during assembly; involved in the secretion of the major curlin subunit CsgA across the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.984 |
| AKL11481.1 | AKL11480.1 | AB182_09290 | AB182_09285 | Curli assembly protein CsgE; Derived by automated computational analysis using gene prediction method: Protein Homology. | Curli assembly protein CsgF; Nucleator protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli secretion and assembly protein complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.990 |
| AKL11481.1 | AKL15254.1 | AB182_09290 | AB182_09295 | Curli assembly protein CsgE; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Activates the csgBA and csgDEFG operons involved in biofilm formation; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.986 |
| AKL15140.1 | AKL11479.1 | AB182_29405 | AB182_09280 | Hydrogenase 2-specific chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology. | Curli production assembly/transport protein CsgG; Involved in the stability of the curlin proteins during assembly; involved in the secretion of the major curlin subunit CsgA across the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.414 |
| AKL15140.1 | AKL11480.1 | AB182_29405 | AB182_09285 | Hydrogenase 2-specific chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology. | Curli assembly protein CsgF; Nucleator protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli secretion and assembly protein complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.580 |
| AKL15140.1 | csgB | AB182_29405 | AB182_09300 | Hydrogenase 2-specific chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology. | Curlin minor subunit CsgB; CsgB; functions as a nucleator in the assembly of curli (coiled surface structures) on the cell surface; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.499 |
| AKL15254.1 | AKL11479.1 | AB182_09295 | AB182_09280 | Transcriptional regulator; Activates the csgBA and csgDEFG operons involved in biofilm formation; Derived by automated computational analysis using gene prediction method: Protein Homology. | Curli production assembly/transport protein CsgG; Involved in the stability of the curlin proteins during assembly; involved in the secretion of the major curlin subunit CsgA across the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.902 |
| AKL15254.1 | AKL11480.1 | AB182_09295 | AB182_09285 | Transcriptional regulator; Activates the csgBA and csgDEFG operons involved in biofilm formation; Derived by automated computational analysis using gene prediction method: Protein Homology. | Curli assembly protein CsgF; Nucleator protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli secretion and assembly protein complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.977 |
| AKL15254.1 | AKL11481.1 | AB182_09295 | AB182_09290 | Transcriptional regulator; Activates the csgBA and csgDEFG operons involved in biofilm formation; Derived by automated computational analysis using gene prediction method: Protein Homology. | Curli assembly protein CsgE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.986 |
| AKL15254.1 | csgB | AB182_09295 | AB182_09300 | Transcriptional regulator; Activates the csgBA and csgDEFG operons involved in biofilm formation; Derived by automated computational analysis using gene prediction method: Protein Homology. | Curlin minor subunit CsgB; CsgB; functions as a nucleator in the assembly of curli (coiled surface structures) on the cell surface; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.535 |
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