STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL11899.1Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa)    
Predicted Functional Partners:
AKL11897.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.946
AKL11898.1
Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  
0.863
AKL11896.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.842
AKL14935.1
Aerobic respiration control sensor protein ArcB; Sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon; hybrid sensory histidine kinase in two-component regulatory system with ArcA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.722
AKL13649.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.607
glnL
Nitrogen regulation protein NR(II); Sensory histidine kinase in two-component regulatory system with GlnG; acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.582
AKL10846.1
Histidine kinase; Part of the GlrKR two-component signal transduction system involved in the regulation of glmY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.525
AKL12858.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.507
AKL15410.1
Sensor protein ZraS; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.502
AKL13463.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.461
Your Current Organism:
Kluyvera intermedia
NCBI taxonomy Id: 61648
Other names: ATCC 33110, CCUG 14183, CIP 79.27, CUETM 77-130, DSM 4581, Enterobacter intermedium, Enterobacter intermedius, Enterobacter intrermedium, K. intermedia, Kluyvera cochleae, LMG 2785, LMG:2785, NBRC 102594, NCTC 12125, strain Gavini E 86
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