STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL12465.1Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (497 aa)    
Predicted Functional Partners:
AKL12466.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.746
AKL12464.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.737
AKL12289.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.721
AKL15308.1
Galactoside permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.718
AKL12467.1
Fructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.691
AKL12463.1
Glycosyl hydrolase family 32; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.648
AKL15151.1
Glycosyl hydrolase family 32; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
     0.625
AKL12462.1
Sucrose operon repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.546
AKL10878.1
PTS glucose transporter subunit IIBC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.498
AKL11540.1
PTS glucose-specific subunit IIBC; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.498
Your Current Organism:
Kluyvera intermedia
NCBI taxonomy Id: 61648
Other names: ATCC 33110, CCUG 14183, CIP 79.27, CUETM 77-130, DSM 4581, Enterobacter intermedium, Enterobacter intermedius, Enterobacter intrermedium, K. intermedia, Kluyvera cochleae, LMG 2785, LMG:2785, NBRC 102594, NCTC 12125, strain Gavini E 86
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