STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML56351.1Hypothetical protein. (201 aa)    
Predicted Functional Partners:
AML56349.1
Hypothetical protein.
 
     0.946
pipB2_1
Pentapeptide repeat.
 
     0.945
AML56352.1
Hypothetical protein.
 
     0.944
AML56217.1
Hypothetical protein.
 
     0.786
AML57945.1
Putative transmembrane protein.
  
     0.755
AML58210.1
Phage replication protein.
  
     0.685
AML57977.1
Protein phosphatase ImpM.
 
     0.658
AML57981.1
Type VI secretion lipoprotein/VasD.
 
     0.589
AML58508.1
Protein of unknown function DUF1486.
  
     0.573
AML57068.1
Hypothetical protein.
  
     0.569
Your Current Organism:
Serratia rubidaea
NCBI taxonomy Id: 61652
Other names: ATCC 27593, CCUG 10981, CCUG 9286, CIP 103234, DSM 4480, LMG 5019, LMG:5019, NBRC 103169, NCTC 12971, S. rubidaea, Serratia marinorubra, Serratia sp. V1E5a
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.