Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AML56795.1 | diaA | AXX16_1073 | AXX16_1072 | Putative endonuclease distantly related to archaeal Holliday junction resolvase; Belongs to the UPF0102 family. | Phosphoheptose isomerase; Required for the timely initiation of chromosomal replication via direct interactions with the DnaA initiator protein. Belongs to the SIS family. DiaA subfamily. | 0.665 |
AML56795.1 | lpoA | AXX16_1073 | AXX16_1074 | Putative endonuclease distantly related to archaeal Holliday junction resolvase; Belongs to the UPF0102 family. | LppC putative lipoprotein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1A (PBP1a). Belongs to the LpoA family. | 0.848 |
AML56795.1 | osmY_2 | AXX16_1073 | AXX16_1071 | Putative endonuclease distantly related to archaeal Holliday junction resolvase; Belongs to the UPF0102 family. | 21 kDa hemolysin precursor. | 0.616 |
AML56795.1 | rsmI | AXX16_1073 | AXX16_1075 | Putative endonuclease distantly related to archaeal Holliday junction resolvase; Belongs to the UPF0102 family. | rRNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.611 |
AML58942.1 | AML60176.1 | AXX16_3246 | AXX16_4506 | Protein of unknown function DUF883, ElaB. | Putative membrane protein. | 0.659 |
AML58942.1 | osmY_2 | AXX16_3246 | AXX16_1071 | Protein of unknown function DUF883, ElaB. | 21 kDa hemolysin precursor. | 0.476 |
AML60175.1 | AML60176.1 | AXX16_4505 | AXX16_4506 | Hypothetical protein. | Putative membrane protein. | 0.858 |
AML60175.1 | osmY_2 | AXX16_4505 | AXX16_1071 | Hypothetical protein. | 21 kDa hemolysin precursor. | 0.581 |
AML60176.1 | AML58942.1 | AXX16_4506 | AXX16_3246 | Putative membrane protein. | Protein of unknown function DUF883, ElaB. | 0.659 |
AML60176.1 | AML60175.1 | AXX16_4506 | AXX16_4505 | Putative membrane protein. | Hypothetical protein. | 0.858 |
AML60176.1 | osmY_2 | AXX16_4506 | AXX16_1071 | Putative membrane protein. | 21 kDa hemolysin precursor. | 0.554 |
diaA | AML56795.1 | AXX16_1072 | AXX16_1073 | Phosphoheptose isomerase; Required for the timely initiation of chromosomal replication via direct interactions with the DnaA initiator protein. Belongs to the SIS family. DiaA subfamily. | Putative endonuclease distantly related to archaeal Holliday junction resolvase; Belongs to the UPF0102 family. | 0.665 |
diaA | lpoA | AXX16_1072 | AXX16_1074 | Phosphoheptose isomerase; Required for the timely initiation of chromosomal replication via direct interactions with the DnaA initiator protein. Belongs to the SIS family. DiaA subfamily. | LppC putative lipoprotein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1A (PBP1a). Belongs to the LpoA family. | 0.641 |
diaA | osmY_2 | AXX16_1072 | AXX16_1071 | Phosphoheptose isomerase; Required for the timely initiation of chromosomal replication via direct interactions with the DnaA initiator protein. Belongs to the SIS family. DiaA subfamily. | 21 kDa hemolysin precursor. | 0.832 |
diaA | rsmI | AXX16_1072 | AXX16_1075 | Phosphoheptose isomerase; Required for the timely initiation of chromosomal replication via direct interactions with the DnaA initiator protein. Belongs to the SIS family. DiaA subfamily. | rRNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.454 |
lpoA | AML56795.1 | AXX16_1074 | AXX16_1073 | LppC putative lipoprotein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1A (PBP1a). Belongs to the LpoA family. | Putative endonuclease distantly related to archaeal Holliday junction resolvase; Belongs to the UPF0102 family. | 0.848 |
lpoA | diaA | AXX16_1074 | AXX16_1072 | LppC putative lipoprotein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1A (PBP1a). Belongs to the LpoA family. | Phosphoheptose isomerase; Required for the timely initiation of chromosomal replication via direct interactions with the DnaA initiator protein. Belongs to the SIS family. DiaA subfamily. | 0.641 |
lpoA | osmY_2 | AXX16_1074 | AXX16_1071 | LppC putative lipoprotein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1A (PBP1a). Belongs to the LpoA family. | 21 kDa hemolysin precursor. | 0.620 |
lpoA | rsmI | AXX16_1074 | AXX16_1075 | LppC putative lipoprotein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1A (PBP1a). Belongs to the LpoA family. | rRNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.611 |
mlaA | mlaC_2 | AXX16_1902 | AXX16_1053 | Lipoprotein. | Putative ABC transporter, auxiliary component YrbC. | 0.876 |
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