STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
baiA13-oxoacyl-[acyl-carrier protein] reductase. (264 aa)    
Predicted Functional Partners:
AML57123.1
Mannose-6-phosphate isomerase.
 
     0.942
bphD
Alpha/beta hydrolase fold.
 
   0.889
AML57126.1
Aspartate dehydrogenase.
 
     0.876
todE
Glyoxalase family protein.
 
    0.857
ppsA_3
Polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 
 0.848
ilvB_1
Acetolactate synthase large subunit; Belongs to the TPP enzyme family.
 
   0.844
kshA_1
Vanillate O-demethylase oxygenase subunit.
 
     0.810
andAa
Ferredoxin reductase.
 
   0.785
dgoT
Putative glucarate transporter.
 
    0.769
betB_1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
   0.760
Your Current Organism:
Serratia rubidaea
NCBI taxonomy Id: 61652
Other names: ATCC 27593, CCUG 10981, CCUG 9286, CIP 103234, DSM 4480, LMG 5019, LMG:5019, NBRC 103169, NCTC 12971, S. rubidaea, Serratia marinorubra, Serratia sp. V1E5a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.