Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AML55889.1 | era_2 | AXX16_0127 | AXX16_1654 | SSU ribosomal protein S15p (S13e). | GTP-binding protein Era. | 0.926 |
AML55889.1 | rnc | AXX16_0127 | AXX16_1653 | SSU ribosomal protein S15p (S13e). | Ribonuclease III. | 0.852 |
AML55889.1 | rplM | AXX16_0127 | AXX16_1061 | SSU ribosomal protein S15p (S13e). | LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.993 |
AML55889.1 | rpmA | AXX16_0127 | AXX16_0148 | SSU ribosomal protein S15p (S13e). | LSU ribosomal protein L27p; Belongs to the bacterial ribosomal protein bL27 family. | 0.993 |
AML55889.1 | rpsB | AXX16_0127 | AXX16_1546 | SSU ribosomal protein S15p (S13e). | SSU ribosomal protein S2p (SAe); Belongs to the universal ribosomal protein uS2 family. | 0.997 |
AML55889.1 | rpsF | AXX16_0127 | AXX16_0177 | SSU ribosomal protein S15p (S13e). | SSU ribosomal protein S6p; Binds together with S18 to 16S ribosomal RNA. | 0.993 |
AML55889.1 | rpsI | AXX16_0127 | AXX16_1062 | SSU ribosomal protein S15p (S13e). | SSU ribosomal protein S9p (S16e); Belongs to the universal ribosomal protein uS9 family. | 0.997 |
AML55889.1 | rpsP | AXX16_0127 | AXX16_4290 | SSU ribosomal protein S15p (S13e). | SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family. | 0.996 |
AML58405.1 | rnc | AXX16_2708 | AXX16_1653 | Metal-dependent phosphoesterase (PHP family). | Ribonuclease III. | 0.897 |
era_2 | AML55889.1 | AXX16_1654 | AXX16_0127 | GTP-binding protein Era. | SSU ribosomal protein S15p (S13e). | 0.926 |
era_2 | recO | AXX16_1654 | AXX16_1655 | GTP-binding protein Era. | DNA recombination and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.923 |
era_2 | rnc | AXX16_1654 | AXX16_1653 | GTP-binding protein Era. | Ribonuclease III. | 0.929 |
era_2 | rplM | AXX16_1654 | AXX16_1061 | GTP-binding protein Era. | LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.429 |
era_2 | rpsB | AXX16_1654 | AXX16_1546 | GTP-binding protein Era. | SSU ribosomal protein S2p (SAe); Belongs to the universal ribosomal protein uS2 family. | 0.909 |
era_2 | rpsF | AXX16_1654 | AXX16_0177 | GTP-binding protein Era. | SSU ribosomal protein S6p; Binds together with S18 to 16S ribosomal RNA. | 0.945 |
era_2 | rpsI | AXX16_1654 | AXX16_1062 | GTP-binding protein Era. | SSU ribosomal protein S9p (S16e); Belongs to the universal ribosomal protein uS9 family. | 0.937 |
era_2 | rpsP | AXX16_1654 | AXX16_4290 | GTP-binding protein Era. | SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family. | 0.952 |
recO | era_2 | AXX16_1655 | AXX16_1654 | DNA recombination and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | GTP-binding protein Era. | 0.923 |
recO | rnc | AXX16_1655 | AXX16_1653 | DNA recombination and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | Ribonuclease III. | 0.882 |
rnc | AML55889.1 | AXX16_1653 | AXX16_0127 | Ribonuclease III. | SSU ribosomal protein S15p (S13e). | 0.852 |
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