STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML57873.1Hypothetical protein. (1308 aa)    
Predicted Functional Partners:
AML58495.1
Hypothetical protein; Belongs to the 4-oxalocrotonate tautomerase family.
  
     0.654
aaeB_3
Putative membrane protein.
  
     0.589
AML60122.1
Phospholipase A1.
  
     0.537
AML57872.1
Extracellular serine protease precursor.
 
    
0.470
AML59232.1
Phospholipase A1.
  
     0.467
iutA
Aerobactin siderophore receptor IutA.
  
 
 
 0.457
Your Current Organism:
Serratia rubidaea
NCBI taxonomy Id: 61652
Other names: ATCC 27593, CCUG 10981, CCUG 9286, CIP 103234, DSM 4480, LMG 5019, LMG:5019, NBRC 103169, NCTC 12971, S. rubidaea, Serratia marinorubra, Serratia sp. V1E5a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.