Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AML57108.1 | AML57109.1 | AXX16_1388 | AXX16_1389 | Hypothetical protein. | Hypothetical protein. | 0.980 |
AML57108.1 | AML58580.1 | AXX16_1388 | AXX16_2883 | Hypothetical protein. | Integral membrane protein. | 0.976 |
AML57108.1 | AML59394.1 | AXX16_1388 | AXX16_3703 | Hypothetical protein. | Integral membrane protein. | 0.976 |
AML57108.1 | pyrD_2 | AXX16_1388 | AXX16_3450 | Hypothetical protein. | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.406 |
AML57108.1 | pyrE | AXX16_1388 | AXX16_0620 | Hypothetical protein. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.433 |
AML57108.1 | pyrF | AXX16_1388 | AXX16_2728 | Hypothetical protein. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.430 |
AML57109.1 | AML57108.1 | AXX16_1389 | AXX16_1388 | Hypothetical protein. | Hypothetical protein. | 0.980 |
AML57109.1 | AML58580.1 | AXX16_1389 | AXX16_2883 | Hypothetical protein. | Integral membrane protein. | 0.925 |
AML57109.1 | AML59394.1 | AXX16_1389 | AXX16_3703 | Hypothetical protein. | Integral membrane protein. | 0.975 |
AML57109.1 | pyrD_2 | AXX16_1389 | AXX16_3450 | Hypothetical protein. | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.406 |
AML57109.1 | pyrE | AXX16_1389 | AXX16_0620 | Hypothetical protein. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.433 |
AML57109.1 | pyrF | AXX16_1389 | AXX16_2728 | Hypothetical protein. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.430 |
AML58580.1 | AML57108.1 | AXX16_2883 | AXX16_1388 | Integral membrane protein. | Hypothetical protein. | 0.976 |
AML58580.1 | AML57109.1 | AXX16_2883 | AXX16_1389 | Integral membrane protein. | Hypothetical protein. | 0.925 |
AML58580.1 | AML58581.1 | AXX16_2883 | AXX16_2884 | Integral membrane protein. | Epoxide hydrolase. | 0.773 |
AML58580.1 | AML58582.1 | AXX16_2883 | AXX16_2885 | Integral membrane protein. | Transcriptional regulator, TetR family. | 0.615 |
AML58580.1 | AML59394.1 | AXX16_2883 | AXX16_3703 | Integral membrane protein. | Integral membrane protein. | 0.921 |
AML58580.1 | malK_2 | AXX16_2883 | AXX16_2887 | Integral membrane protein. | Maltose/maltodextrin transport ATP-binding protein MalK; Belongs to the ABC transporter superfamily. | 0.470 |
AML58580.1 | malL | AXX16_2883 | AXX16_2886 | Integral membrane protein. | Alpha-glucosidase. | 0.485 |
AML58580.1 | pyrD_2 | AXX16_2883 | AXX16_3450 | Integral membrane protein. | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.406 |
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