STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hemSHemin transport protein HmuS. (345 aa)    
Predicted Functional Partners:
hmuT_2
Periplasmic hemin-binding protein.
 
  
 0.993
hmuV
ABC-type hemin transport system, ATPase component; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
  
 0.981
hxuC_2
TonB-dependent hemin, ferrichrome receptor.
 
  
 0.929
yfhA
Hemin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.929
viuB_2
Iron-chelator utilization protein.
 
    0.682
AML58824.1
Hemin uptake protein HemP.
  
  
 0.632
AML57807.1
Iron(III) dicitrate transport system permease protein FecD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.545
btuC
Vitamin B12 ABC transporter, permease component BtuC; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane.
  
   
 0.499
fecD
ABC transporter (iron.B12.siderophore.hemin), permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.481
btuF
Vitamin B12 ABC transporter, B12-binding component BtuF; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC.
 
   
 0.432
Your Current Organism:
Serratia rubidaea
NCBI taxonomy Id: 61652
Other names: ATCC 27593, CCUG 10981, CCUG 9286, CIP 103234, DSM 4480, LMG 5019, LMG:5019, NBRC 103169, NCTC 12971, S. rubidaea, Serratia marinorubra, Serratia sp. V1E5a
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