Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AML57741.1 | AML58692.1 | AXX16_2034 | AXX16_2995 | Malonyl CoA-acyl carrier protein transacylase. | Pyruvate-flavodoxin oxidoreductase. | 0.886 |
AML57741.1 | gutB | AXX16_2034 | AXX16_1190 | Malonyl CoA-acyl carrier protein transacylase. | Alcohol dehydrogenase. | 0.600 |
AML57741.1 | kbl | AXX16_2034 | AXX16_0643 | Malonyl CoA-acyl carrier protein transacylase. | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.495 |
AML57741.1 | tdh_2 | AXX16_2034 | AXX16_1748 | Malonyl CoA-acyl carrier protein transacylase. | Starvation sensing protein RspB. | 0.460 |
AML57741.1 | tdh_6 | AXX16_2034 | AXX16_3773 | Malonyl CoA-acyl carrier protein transacylase. | Sorbitol dehydrogenase. | 0.460 |
AML58692.1 | AML57741.1 | AXX16_2995 | AXX16_2034 | Pyruvate-flavodoxin oxidoreductase. | Malonyl CoA-acyl carrier protein transacylase. | 0.886 |
AML58692.1 | tdh_2 | AXX16_2995 | AXX16_1748 | Pyruvate-flavodoxin oxidoreductase. | Starvation sensing protein RspB. | 0.478 |
AML58692.1 | tdh_6 | AXX16_2995 | AXX16_3773 | Pyruvate-flavodoxin oxidoreductase. | Sorbitol dehydrogenase. | 0.478 |
AML59465.1 | tdh_6 | AXX16_3774 | AXX16_3773 | Regulator of L-galactonate catabolism YjjM. | Sorbitol dehydrogenase. | 0.686 |
araA_1 | tdh_6 | AXX16_2735 | AXX16_3773 | L-arabinose isomerase. | Sorbitol dehydrogenase. | 0.812 |
ftsE_2 | tdh_6 | AXX16_3772 | AXX16_3773 | Phosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | Sorbitol dehydrogenase. | 0.484 |
gutB | AML57741.1 | AXX16_1190 | AXX16_2034 | Alcohol dehydrogenase. | Malonyl CoA-acyl carrier protein transacylase. | 0.600 |
gutB | tdh_2 | AXX16_1190 | AXX16_1748 | Alcohol dehydrogenase. | Starvation sensing protein RspB. | 0.544 |
gutB | tdh_6 | AXX16_1190 | AXX16_3773 | Alcohol dehydrogenase. | Sorbitol dehydrogenase. | 0.601 |
gutB | xylB_4 | AXX16_1190 | AXX16_3748 | Alcohol dehydrogenase. | Benzyl alcohol dehydrogenase. | 0.405 |
kbl | AML57741.1 | AXX16_0643 | AXX16_2034 | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | Malonyl CoA-acyl carrier protein transacylase. | 0.495 |
kbl | tdh_2 | AXX16_0643 | AXX16_1748 | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | Starvation sensing protein RspB. | 0.455 |
kbl | tdh_6 | AXX16_0643 | AXX16_3773 | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | Sorbitol dehydrogenase. | 0.484 |
tdh_2 | AML57741.1 | AXX16_1748 | AXX16_2034 | Starvation sensing protein RspB. | Malonyl CoA-acyl carrier protein transacylase. | 0.460 |
tdh_2 | AML58692.1 | AXX16_1748 | AXX16_2995 | Starvation sensing protein RspB. | Pyruvate-flavodoxin oxidoreductase. | 0.478 |
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