STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabZ_3(3R)-hydroxymyristoyl-[ACP] dehydratase. (114 aa)    
Predicted Functional Partners:
AML59914.1
3-hydroxydecanoyl-[ACP] dehydratase.
 
 
 
 0.981
AML59922.1
Acyl-CoA synthetase, AMP-(fatty) acid ligase.
   
 0.975
AML59927.1
3-oxoacyl-[ACP] synthase.
 
 
 0.969
fabF_4
3-oxoacyl-[ACP] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
 0.968
fabF_3
3-oxoacyl-[ACP] synthase FabV like; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
 0.967
acpP_1
Acyl carrier protein (ACP2).
 
   0.958
AML59925.1
Acyl carrier protein (ACP1).
 
   0.957
AML59923.1
Hypothetical protein.
 
    0.954
AML59917.1
Membrane protein, exporter.
 
     0.953
AML59918.1
Putative transmembrane protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
     0.953
Your Current Organism:
Serratia rubidaea
NCBI taxonomy Id: 61652
Other names: ATCC 27593, CCUG 10981, CCUG 9286, CIP 103234, DSM 4480, LMG 5019, LMG:5019, NBRC 103169, NCTC 12971, S. rubidaea, Serratia marinorubra, Serratia sp. V1E5a
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