STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO05064.1Hypothetical protein. (609 aa)    
Predicted Functional Partners:
KRO03380.1
Hypothetical protein.
 
     0.759
KRO00619.1
Hypothetical protein.
  
     0.757
KRO04117.1
Hypothetical protein.
  
     0.753
KRO04794.1
Hypothetical protein.
  
     0.717
KRO03955.1
Cell surface protein, gy family.
  
     0.700
KRO03957.1
Hypothetical protein.
  
     0.699
KRO04739.1
Hypothetical protein.
  
     0.697
KRO03794.1
RND superfamily drug exporter.
  
     0.687
KRO03831.1
Hypothetical protein.
  
     0.667
KRO04783.1
Beta-fructosidase.
  
     0.666
Your Current Organism:
Lactobacillus paucivorans
NCBI taxonomy Id: 616990
Other names: DSM 22467, JCM 18045, L. paucivorans, LMG 25291, LMG:25291, Lactobacillus paucivorans Ehrmann et al. 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.