STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO01124.1Hypothetical protein. (572 aa)    
Predicted Functional Partners:
KRO04135.1
Hypothetical protein.
  
     0.766
KRO04136.1
Hypothetical protein.
  
     0.761
KRN97871.1
Hypothetical protein.
  
     0.650
KRO04134.1
Hypothetical protein.
  
     0.626
KRO04117.1
Hypothetical protein.
  
     0.553
KRO03622.1
Cell surface protein.
  
     0.507
KRO04962.1
Hypothetical protein.
  
     0.476
KRO04133.1
Sortase (surface protein transpeptidase).
  
     0.474
KRO00619.1
Hypothetical protein.
  
     0.467
KRO01123.1
Hypothetical protein.
       0.459
Your Current Organism:
Lactobacillus paucivorans
NCBI taxonomy Id: 616990
Other names: DSM 22467, JCM 18045, L. paucivorans, LMG 25291, LMG:25291, Lactobacillus paucivorans Ehrmann et al. 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.