STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO01134.1Hypothetical protein. (467 aa)    
Predicted Functional Partners:
KRO01133.1
Hypothetical protein.
     0.873
KRO03732.1
Hypothetical protein.
  
     0.646
KRN97670.1
Pentapeptide repeat-containing protein.
    
   0.621
KRO04480.1
Hypothetical protein.
  
     0.563
KRO00623.1
Major facilitator superfamily permease.
  
     0.550
KRO04625.1
Cell surface protein.
  
     0.526
KRO03514.1
Hypothetical protein.
  
  
 0.521
KRO05487.1
Teichoic acid polysaccharide glycosyl transferase.
  
     0.517
KRO01723.1
LysM domain-containing protein.
    
   0.507
KRO04853.1
Aggregation promoting factor-like surface protein.
    
   0.507
Your Current Organism:
Lactobacillus paucivorans
NCBI taxonomy Id: 616990
Other names: DSM 22467, JCM 18045, L. paucivorans, LMG 25291, LMG:25291, Lactobacillus paucivorans Ehrmann et al. 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.