Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN97723.1 | KRO00624.1 | IV54_GL001192 | IV54_GL000567 | Glycine cleavage system H protein (lipoate-binding). | Glutathione reductase. | 0.867 |
KRN97723.1 | KRO03569.1 | IV54_GL001192 | IV54_GL000018 | Glycine cleavage system H protein (lipoate-binding). | Glycine cleavage system H protein (lipoate-binding). | 0.976 |
KRN97723.1 | KRO04346.1 | IV54_GL001192 | IV54_GL001405 | Glycine cleavage system H protein (lipoate-binding). | Glutamine synthetase. | 0.951 |
KRN97723.1 | KRO04922.1 | IV54_GL001192 | IV54_GL000646 | Glycine cleavage system H protein (lipoate-binding). | Acetoin pyruvate dehydrogenase complex, E2 component, dihydrolipoamide succinyltransferase. | 0.551 |
KRN97723.1 | glyA | IV54_GL001192 | IV54_GL000034 | Glycine cleavage system H protein (lipoate-binding). | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.983 |
KRO00624.1 | KRN97723.1 | IV54_GL000567 | IV54_GL001192 | Glutathione reductase. | Glycine cleavage system H protein (lipoate-binding). | 0.867 |
KRO00624.1 | KRO03525.1 | IV54_GL000567 | IV54_GL000113 | Glutathione reductase. | Thioredoxin reductase. | 0.718 |
KRO00624.1 | KRO03569.1 | IV54_GL000567 | IV54_GL000018 | Glutathione reductase. | Glycine cleavage system H protein (lipoate-binding). | 0.817 |
KRO00624.1 | KRO04346.1 | IV54_GL000567 | IV54_GL001405 | Glutathione reductase. | Glutamine synthetase. | 0.833 |
KRO00624.1 | KRO04400.1 | IV54_GL000567 | IV54_GL001462 | Glutathione reductase. | Thiol-disulfide isomerase and thioredoxin. | 0.879 |
KRO00624.1 | KRO04782.1 | IV54_GL000567 | IV54_GL000807 | Glutathione reductase. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.884 |
KRO00624.1 | KRO04921.1 | IV54_GL000567 | IV54_GL000645 | Glutathione reductase. | Acetoin dehydrogenase complex, E1 component, beta subunit. | 0.983 |
KRO00624.1 | KRO04922.1 | IV54_GL000567 | IV54_GL000646 | Glutathione reductase. | Acetoin pyruvate dehydrogenase complex, E2 component, dihydrolipoamide succinyltransferase. | 0.988 |
KRO00624.1 | glyA | IV54_GL000567 | IV54_GL000034 | Glutathione reductase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.836 |
KRO00624.1 | pdhA | IV54_GL000567 | IV54_GL000644 | Glutathione reductase. | Acetoin dehydrogenase complex, E1 component, alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). | 0.923 |
KRO03525.1 | KRO00624.1 | IV54_GL000113 | IV54_GL000567 | Thioredoxin reductase. | Glutathione reductase. | 0.718 |
KRO03525.1 | KRO04346.1 | IV54_GL000113 | IV54_GL001405 | Thioredoxin reductase. | Glutamine synthetase. | 0.720 |
KRO03525.1 | KRO04400.1 | IV54_GL000113 | IV54_GL001462 | Thioredoxin reductase. | Thiol-disulfide isomerase and thioredoxin. | 0.898 |
KRO03525.1 | glyA | IV54_GL000113 | IV54_GL000034 | Thioredoxin reductase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.517 |
KRO03569.1 | KRN97723.1 | IV54_GL000018 | IV54_GL001192 | Glycine cleavage system H protein (lipoate-binding). | Glycine cleavage system H protein (lipoate-binding). | 0.976 |
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