STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO04625.1Cell surface protein. (355 aa)    
Predicted Functional Partners:
KRO04626.1
Hypothetical protein.
 
     0.872
KRO04623.1
Hypothetical protein.
    
  0.710
KRO03375.1
Hypothetical protein.
 
   
 0.694
KRO04624.1
Hypothetical protein.
       0.675
KRO04744.1
Cell surface protein.
 
     0.619
KRO04818.1
Extracellular protein.
 
     0.611
KRO04734.1
Hypothetical protein.
   
   0.593
KRO00619.1
Hypothetical protein.
   
   0.590
KRO03477.1
Hypothetical protein.
 
    0.581
KRO04820.1
Extracellular protein.
  
     0.555
Your Current Organism:
Lactobacillus paucivorans
NCBI taxonomy Id: 616990
Other names: DSM 22467, JCM 18045, L. paucivorans, LMG 25291, LMG:25291, Lactobacillus paucivorans Ehrmann et al. 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.