Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN97546.1 | KRN97580.1 | IV54_GL001315 | IV54_GL001350 | NUDIX family hydrolase. | RelA SpoT domain-containing protein. | 0.410 |
KRN97546.1 | KRO03413.1 | IV54_GL001315 | IV54_GL000319 | NUDIX family hydrolase. | NAD-dependent deacetylase. | 0.551 |
KRN97546.1 | cinA | IV54_GL001315 | IV54_GL001536 | NUDIX family hydrolase. | Competence damage-inducible protein A; Belongs to the CinA family. | 0.891 |
KRN97546.1 | nadD | IV54_GL001315 | IV54_GL001441 | NUDIX family hydrolase. | Nicotinic acid mononucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.549 |
KRN97546.1 | nadE | IV54_GL001315 | IV54_GL000341 | NUDIX family hydrolase. | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | 0.555 |
KRN97546.1 | nadK | IV54_GL001315 | IV54_GL001349 | NUDIX family hydrolase. | Inorganic polyphosphate ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.562 |
KRN97578.1 | KRN97580.1 | IV54_GL001348 | IV54_GL001350 | Pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | RelA SpoT domain-containing protein. | 0.848 |
KRN97578.1 | nadK | IV54_GL001348 | IV54_GL001349 | Pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Inorganic polyphosphate ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.853 |
KRN97578.1 | rsfS | IV54_GL001348 | IV54_GL001439 | Pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Iojap family protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.807 |
KRN97580.1 | KRN97546.1 | IV54_GL001350 | IV54_GL001315 | RelA SpoT domain-containing protein. | NUDIX family hydrolase. | 0.410 |
KRN97580.1 | KRN97578.1 | IV54_GL001350 | IV54_GL001348 | RelA SpoT domain-containing protein. | Pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.848 |
KRN97580.1 | nadK | IV54_GL001350 | IV54_GL001349 | RelA SpoT domain-containing protein. | Inorganic polyphosphate ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.875 |
KRO01182.1 | KRO03413.1 | IV54_GL000540 | IV54_GL000319 | Dehydrogenase related protein. | NAD-dependent deacetylase. | 0.671 |
KRO01182.1 | nadK | IV54_GL000540 | IV54_GL001349 | Dehydrogenase related protein. | Inorganic polyphosphate ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.552 |
KRO03413.1 | KRN97546.1 | IV54_GL000319 | IV54_GL001315 | NAD-dependent deacetylase. | NUDIX family hydrolase. | 0.551 |
KRO03413.1 | KRO01182.1 | IV54_GL000319 | IV54_GL000540 | NAD-dependent deacetylase. | Dehydrogenase related protein. | 0.671 |
KRO03413.1 | cinA | IV54_GL000319 | IV54_GL001536 | NAD-dependent deacetylase. | Competence damage-inducible protein A; Belongs to the CinA family. | 0.693 |
KRO03413.1 | coaD | IV54_GL000319 | IV54_GL000655 | NAD-dependent deacetylase. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.500 |
KRO03413.1 | nadD | IV54_GL000319 | IV54_GL001441 | NAD-dependent deacetylase. | Nicotinic acid mononucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.964 |
KRO03413.1 | nadE | IV54_GL000319 | IV54_GL000341 | NAD-dependent deacetylase. | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | 0.959 |
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