STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO04327.1Outer membrane protein. (879 aa)    
Predicted Functional Partners:
KRO01733.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
    0.602
KRN97644.1
Hypothetical protein.
  
     0.507
KRO03375.1
Hypothetical protein.
 
  
 0.503
KRO05524.1
Hypothetical protein.
 
  
  0.497
KRO04744.1
Cell surface protein.
  
    0.493
KRO04134.1
Hypothetical protein.
 
  
 0.466
KRO05507.1
Cell surface protein, gy family.
  
     0.453
KRO04328.1
DNA repair ATPase; May be involved in recombinational repair of damaged DNA.
       0.444
KRO04486.1
Outer membrane protein.
 
     0.430
KRO04133.1
Sortase (surface protein transpeptidase).
 
  
 0.410
Your Current Organism:
Lactobacillus paucivorans
NCBI taxonomy Id: 616990
Other names: DSM 22467, JCM 18045, L. paucivorans, LMG 25291, LMG:25291, Lactobacillus paucivorans Ehrmann et al. 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.