STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO04154.1ABC-type oligopeptide transport system, periplasmic component. (536 aa)    
Predicted Functional Partners:
KRO01255.1
ABC-type dipeptide oligopeptide nickel transport system, permease component.
 
 0.936
KRO01254.1
ABC-type dipeptide oligopeptide nickel transport system, permease component.
 
 0.931
KRO01253.1
ABC-type dipeptide oligopeptide nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.905
KRO01252.1
ABC-type oligopeptide transport system, ATPase component.
 
 0.895
KRN97678.1
ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
 0.745
KRN97679.1
ABC-type dipeptide oligopeptide nickel transport system, permease component.
 
 
 0.737
KRN97677.1
ABC-type dipeptide oligopeptide nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
 0.727
KRN97680.1
ABC-type dipeptide oligopeptide nickel transport system, permease component.
 
 
 0.721
KRN97681.1
ABC-type oligopeptide transport system, periplasmic component.
  
 
0.547
KRO01257.1
ABC-type oligopeptide transport system, periplasmic component.
  
  
 
0.546
Your Current Organism:
Lactobacillus paucivorans
NCBI taxonomy Id: 616990
Other names: DSM 22467, JCM 18045, L. paucivorans, LMG 25291, LMG:25291, Lactobacillus paucivorans Ehrmann et al. 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.