STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO03957.1Hypothetical protein. (680 aa)    
Predicted Functional Partners:
KRO00619.1
Hypothetical protein.
 
 
   0.803
KRO03959.1
Hypothetical protein.
 
    0.759
KRO03380.1
Hypothetical protein.
  
     0.757
KRO04783.1
Beta-fructosidase.
 
  
 0.752
KRN97645.1
Hypothetical protein.
 
     0.742
KRO04489.1
Hypothetical protein.
  
     0.711
KRO04799.1
Hypothetical protein.
 
  
 0.707
KRO05064.1
Hypothetical protein.
  
     0.699
KRO05066.1
Hypothetical protein.
  
     0.699
KRO04256.1
Adhesion exoprotein.
  
     0.687
Your Current Organism:
Lactobacillus paucivorans
NCBI taxonomy Id: 616990
Other names: DSM 22467, JCM 18045, L. paucivorans, LMG 25291, LMG:25291, Lactobacillus paucivorans Ehrmann et al. 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.