STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO03940.1UspA family nucleotide-binding protein. (152 aa)    
Predicted Functional Partners:
KRO03624.1
Hypothetical protein.
  
     0.676
KRO03905.1
Hypothetical protein.
  
     0.592
KRO03414.1
Hypothetical protein.
  
     0.553
KRO03939.1
HAD family sugar phosphatase.
  
    0.546
KRO03906.1
Hypothetical protein.
  
     0.543
KRO03370.1
Hypothetical protein.
  
     0.521
KRO00287.1
Hypothetical protein.
  
     0.514
KRO03941.1
Hypothetical protein.
       0.498
KRO03559.1
Hypothetical protein.
  
     0.472
KRO04746.1
Hypothetical protein.
  
     0.455
Your Current Organism:
Lactobacillus paucivorans
NCBI taxonomy Id: 616990
Other names: DSM 22467, JCM 18045, L. paucivorans, LMG 25291, LMG:25291, Lactobacillus paucivorans Ehrmann et al. 2010
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.