STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO03796.1Transcriptional regulator. (178 aa)    
Predicted Functional Partners:
KRO03795.1
Major facilitator superfamily permease.
 
     0.836
KRO04706.1
Transcriptional regulator.
  
   
 0.558
KRO04818.1
Extracellular protein.
  
     0.527
KRO03797.1
Transcriptional regulator.
       0.517
KRO04073.1
Oxidoreductase.
  
     0.487
KRO01370.1
Hypothetical protein.
  
     0.477
KRN97641.1
Hypothetical protein.
  
     0.464
KRN97573.1
Hypothetical protein.
  
    0.438
KRO04416.1
Hypothetical protein.
  
     0.411
KRO04808.1
Csn protein.
  
     0.407
Your Current Organism:
Lactobacillus paucivorans
NCBI taxonomy Id: 616990
Other names: DSM 22467, JCM 18045, L. paucivorans, LMG 25291, LMG:25291, Lactobacillus paucivorans Ehrmann et al. 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.