STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO03728.12,3-cyclic-nucleotide 2-phosphodiesterase; Belongs to the 5'-nucleotidase family. (518 aa)    
Predicted Functional Partners:
KRO01128.1
Adenosine deaminase.
 
  
 0.922
KRO03727.1
Hypothetical protein.
 
   
 0.866
KRO03726.1
ABC-type phosphate phosphonate transport system, permease component.
 
   
 0.848
phnC
Phosphate phosphonate ABC transporter ATPase; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
   
 0.837
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
   
 
  0.819
KRO03805.1
Inosine-uridine nucleoside N-ribohydrolase.
   
 
  0.814
udk
Uridine kinase.
  
 
  0.813
KRO01209.1
Cytidine deaminase.
    
  0.812
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.779
KRO03724.1
Phosphate phosphonate ABC transporter periplasmic protein.
 
     0.754
Your Current Organism:
Lactobacillus paucivorans
NCBI taxonomy Id: 616990
Other names: DSM 22467, JCM 18045, L. paucivorans, LMG 25291, LMG:25291, Lactobacillus paucivorans Ehrmann et al. 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.