Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000733925_00549 | GCA_000733925_00550 | GCA_000733925_00549 | GCA_000733925_00550 | Unannotated protein. | Unannotated protein. | 0.576 |
GCA_000733925_00550 | GCA_000733925_00549 | GCA_000733925_00550 | GCA_000733925_00549 | Unannotated protein. | Unannotated protein. | 0.576 |
GCA_000733925_00550 | GCA_000733925_00849 | GCA_000733925_00550 | GCA_000733925_00849 | Unannotated protein. | Unannotated protein. | 0.473 |
GCA_000733925_00550 | GCA_000733925_01410 | GCA_000733925_00550 | GCA_000733925_01410 | Unannotated protein. | Unannotated protein. | 0.515 |
GCA_000733925_00550 | GCA_000733925_03137 | GCA_000733925_00550 | GCA_000733925_03137 | Unannotated protein. | Unannotated protein; Molecular chaperone. Has ATPase activity. | 0.512 |
GCA_000733925_00550 | GCA_000733925_03602 | GCA_000733925_00550 | GCA_000733925_03602 | Unannotated protein. | Unannotated protein. | 0.491 |
GCA_000733925_00550 | fusA | GCA_000733925_00550 | GCA_000733925_03472 | Unannotated protein. | Unannotated protein; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.551 |
GCA_000733925_00550 | groL | GCA_000733925_00550 | GCA_000733925_03812 | Unannotated protein. | Unannotated protein; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.574 |
GCA_000733925_00550 | grpE | GCA_000733925_00550 | GCA_000733925_02994 | Unannotated protein. | Unannotated protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depe [...] | 0.519 |
GCA_000733925_00550 | hrb | GCA_000733925_00550 | GCA_000733925_02216 | Unannotated protein. | Unannotated protein. | 0.529 |
GCA_000733925_00550 | trxB | GCA_000733925_00550 | GCA_000733925_01860 | Unannotated protein. | Unannotated protein. | 0.484 |
GCA_000733925_00849 | GCA_000733925_00550 | GCA_000733925_00849 | GCA_000733925_00550 | Unannotated protein. | Unannotated protein. | 0.473 |
GCA_000733925_01410 | GCA_000733925_00550 | GCA_000733925_01410 | GCA_000733925_00550 | Unannotated protein. | Unannotated protein. | 0.515 |
GCA_000733925_01410 | GCA_000733925_03602 | GCA_000733925_01410 | GCA_000733925_03602 | Unannotated protein. | Unannotated protein. | 0.412 |
GCA_000733925_01410 | groL | GCA_000733925_01410 | GCA_000733925_03812 | Unannotated protein. | Unannotated protein; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.441 |
GCA_000733925_01410 | hrb | GCA_000733925_01410 | GCA_000733925_02216 | Unannotated protein. | Unannotated protein. | 0.504 |
GCA_000733925_03137 | GCA_000733925_00550 | GCA_000733925_03137 | GCA_000733925_00550 | Unannotated protein; Molecular chaperone. Has ATPase activity. | Unannotated protein. | 0.512 |
GCA_000733925_03137 | groL | GCA_000733925_03137 | GCA_000733925_03812 | Unannotated protein; Molecular chaperone. Has ATPase activity. | Unannotated protein; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.896 |
GCA_000733925_03137 | grpE | GCA_000733925_03137 | GCA_000733925_02994 | Unannotated protein; Molecular chaperone. Has ATPase activity. | Unannotated protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depe [...] | 0.741 |
GCA_000733925_03602 | GCA_000733925_00550 | GCA_000733925_03602 | GCA_000733925_00550 | Unannotated protein. | Unannotated protein. | 0.491 |
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