Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000733925_00566 | acsA | GCA_000733925_00566 | GCA_000733925_01719 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | 0.931 |
GCA_000733925_00566 | bbsG | GCA_000733925_00566 | GCA_000733925_01287 | Unannotated protein. | Unannotated protein. | 0.922 |
GCA_000733925_00566 | fabV | GCA_000733925_00566 | GCA_000733925_03420 | Unannotated protein. | Unannotated protein; Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon- carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family. | 0.906 |
GCA_000733925_00566 | fadA | GCA_000733925_00566 | GCA_000733925_02696 | Unannotated protein. | Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. | 0.948 |
GCA_000733925_00566 | fadN | GCA_000733925_00566 | GCA_000733925_02694 | Unannotated protein. | Unannotated protein. | 0.888 |
GCA_000733925_00566 | iolA | GCA_000733925_00566 | GCA_000733925_00364 | Unannotated protein. | Unannotated protein. | 0.908 |
GCA_000733925_00566 | mmgC | GCA_000733925_00566 | GCA_000733925_00275 | Unannotated protein. | Unannotated protein. | 0.908 |
GCA_000733925_00566 | pccB | GCA_000733925_00566 | GCA_000733925_03379 | Unannotated protein. | Unannotated protein. | 0.925 |
GCA_000733925_00566 | phbA | GCA_000733925_00566 | GCA_000733925_01207 | Unannotated protein. | Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. | 0.954 |
GCA_000733925_00566 | pta | GCA_000733925_00566 | GCA_000733925_01827 | Unannotated protein. | Unannotated protein; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.912 |
acsA | GCA_000733925_00566 | GCA_000733925_01719 | GCA_000733925_00566 | Unannotated protein; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Unannotated protein. | 0.931 |
acsA | fadA | GCA_000733925_01719 | GCA_000733925_02696 | Unannotated protein; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. | 0.906 |
acsA | fadN | GCA_000733925_01719 | GCA_000733925_02694 | Unannotated protein; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Unannotated protein. | 0.796 |
acsA | iolA | GCA_000733925_01719 | GCA_000733925_00364 | Unannotated protein; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Unannotated protein. | 0.934 |
acsA | mmgC | GCA_000733925_01719 | GCA_000733925_00275 | Unannotated protein; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Unannotated protein. | 0.426 |
acsA | pccB | GCA_000733925_01719 | GCA_000733925_03379 | Unannotated protein; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Unannotated protein. | 0.924 |
acsA | phbA | GCA_000733925_01719 | GCA_000733925_01207 | Unannotated protein; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. | 0.953 |
acsA | pta | GCA_000733925_01719 | GCA_000733925_01827 | Unannotated protein; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Unannotated protein; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.949 |
bbsG | GCA_000733925_00566 | GCA_000733925_01287 | GCA_000733925_00566 | Unannotated protein. | Unannotated protein. | 0.922 |
bbsG | fabV | GCA_000733925_01287 | GCA_000733925_03420 | Unannotated protein. | Unannotated protein; Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon- carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family. | 0.906 |
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