Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000733925_00034 | GCA_000733925_00579 | GCA_000733925_00034 | GCA_000733925_00579 | Unannotated protein. | Unannotated protein. | 0.746 |
GCA_000733925_00034 | GCA_000733925_00583 | GCA_000733925_00034 | GCA_000733925_00583 | Unannotated protein. | Unannotated protein. | 0.733 |
GCA_000733925_00034 | coxM | GCA_000733925_00034 | GCA_000733925_00563 | Unannotated protein. | Unannotated protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.887 |
GCA_000733925_00034 | ctaB | GCA_000733925_00034 | GCA_000733925_00577 | Unannotated protein. | Unannotated protein; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.689 |
GCA_000733925_00313 | GCA_000733925_00579 | GCA_000733925_00313 | GCA_000733925_00579 | Unannotated protein. | Unannotated protein. | 0.550 |
GCA_000733925_00313 | GCA_000733925_00583 | GCA_000733925_00313 | GCA_000733925_00583 | Unannotated protein. | Unannotated protein. | 0.679 |
GCA_000733925_00313 | coxM | GCA_000733925_00313 | GCA_000733925_00563 | Unannotated protein. | Unannotated protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.792 |
GCA_000733925_00313 | ctaB | GCA_000733925_00313 | GCA_000733925_00577 | Unannotated protein. | Unannotated protein; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.481 |
GCA_000733925_00579 | GCA_000733925_00034 | GCA_000733925_00579 | GCA_000733925_00034 | Unannotated protein. | Unannotated protein. | 0.746 |
GCA_000733925_00579 | GCA_000733925_00313 | GCA_000733925_00579 | GCA_000733925_00313 | Unannotated protein. | Unannotated protein. | 0.550 |
GCA_000733925_00579 | GCA_000733925_00580 | GCA_000733925_00579 | GCA_000733925_00580 | Unannotated protein. | Unannotated protein. | 0.984 |
GCA_000733925_00579 | GCA_000733925_00581 | GCA_000733925_00579 | GCA_000733925_00581 | Unannotated protein. | Unannotated protein. | 0.729 |
GCA_000733925_00579 | GCA_000733925_00582 | GCA_000733925_00579 | GCA_000733925_00582 | Unannotated protein. | Unannotated protein. | 0.721 |
GCA_000733925_00579 | GCA_000733925_00583 | GCA_000733925_00579 | GCA_000733925_00583 | Unannotated protein. | Unannotated protein. | 0.729 |
GCA_000733925_00579 | GCA_000733925_00584 | GCA_000733925_00579 | GCA_000733925_00584 | Unannotated protein. | Unannotated protein. | 0.648 |
GCA_000733925_00579 | GCA_000733925_02614 | GCA_000733925_00579 | GCA_000733925_02614 | Unannotated protein. | Unannotated protein. | 0.755 |
GCA_000733925_00579 | coxM | GCA_000733925_00579 | GCA_000733925_00563 | Unannotated protein. | Unannotated protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.999 |
GCA_000733925_00579 | ctaB | GCA_000733925_00579 | GCA_000733925_00577 | Unannotated protein. | Unannotated protein; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.996 |
GCA_000733925_00580 | GCA_000733925_00579 | GCA_000733925_00580 | GCA_000733925_00579 | Unannotated protein. | Unannotated protein. | 0.984 |
GCA_000733925_00580 | GCA_000733925_00581 | GCA_000733925_00580 | GCA_000733925_00581 | Unannotated protein. | Unannotated protein. | 0.828 |
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