STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000733925_00710Unannotated protein. (200 aa)    
Predicted Functional Partners:
cadC
Unannotated protein.
 
   
 0.959
GCA_000733925_00711
Unannotated protein.
 
   
 0.923
GCA_000733925_00712
Unannotated protein.
  
  
 0.771
GCA_000733925_00715
Unannotated protein.
 
 
 0.740
GCA_000733925_00713
Unannotated protein.
 
 
 0.713
silP
Unannotated protein.
 
 
 0.646
GCA_000733925_00728
Unannotated protein.
 
 
 0.634
GCA_000733925_02628
Unannotated protein.
 
 
 0.622
GCA_000733925_00609
Unannotated protein.
   
 0.571
yojM
Unannotated protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
 0.571
Your Current Organism:
Arenibacter algicola
NCBI taxonomy Id: 616991
Other names: A. algicola, ATCC BAA-2265, Arenibacter sp. TG409, DSM 24761, strain TG409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.