Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000733925_00798 | GCA_000733925_00801 | GCA_000733925_00798 | GCA_000733925_00801 | Unannotated protein. | Unannotated protein. | 0.557 |
GCA_000733925_00798 | GCA_000733925_00915 | GCA_000733925_00798 | GCA_000733925_00915 | Unannotated protein. | Unannotated protein. | 0.461 |
GCA_000733925_00798 | GCA_000733925_01308 | GCA_000733925_00798 | GCA_000733925_01308 | Unannotated protein. | Unannotated protein. | 0.575 |
GCA_000733925_00798 | GCA_000733925_02690 | GCA_000733925_00798 | GCA_000733925_02690 | Unannotated protein. | Unannotated protein. | 0.401 |
GCA_000733925_00798 | GCA_000733925_02813 | GCA_000733925_00798 | GCA_000733925_02813 | Unannotated protein. | Unannotated protein. | 0.466 |
GCA_000733925_00798 | aroA | GCA_000733925_00798 | GCA_000733925_00802 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.405 |
GCA_000733925_00798 | dtd | GCA_000733925_00798 | GCA_000733925_00800 | Unannotated protein. | Unannotated protein; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | 0.569 |
GCA_000733925_00798 | rsgA | GCA_000733925_00798 | GCA_000733925_00799 | Unannotated protein. | Unannotated protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.570 |
GCA_000733925_00801 | GCA_000733925_00798 | GCA_000733925_00801 | GCA_000733925_00798 | Unannotated protein. | Unannotated protein. | 0.557 |
GCA_000733925_00801 | aroA | GCA_000733925_00801 | GCA_000733925_00802 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.900 |
GCA_000733925_00801 | dtd | GCA_000733925_00801 | GCA_000733925_00800 | Unannotated protein. | Unannotated protein; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | 0.831 |
GCA_000733925_00801 | rsgA | GCA_000733925_00801 | GCA_000733925_00799 | Unannotated protein. | Unannotated protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.834 |
GCA_000733925_00915 | GCA_000733925_00798 | GCA_000733925_00915 | GCA_000733925_00798 | Unannotated protein. | Unannotated protein. | 0.461 |
GCA_000733925_01308 | GCA_000733925_00798 | GCA_000733925_01308 | GCA_000733925_00798 | Unannotated protein. | Unannotated protein. | 0.575 |
GCA_000733925_02690 | GCA_000733925_00798 | GCA_000733925_02690 | GCA_000733925_00798 | Unannotated protein. | Unannotated protein. | 0.401 |
GCA_000733925_02813 | GCA_000733925_00798 | GCA_000733925_02813 | GCA_000733925_00798 | Unannotated protein. | Unannotated protein. | 0.466 |
aroA | GCA_000733925_00798 | GCA_000733925_00802 | GCA_000733925_00798 | Unannotated protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Unannotated protein. | 0.405 |
aroA | GCA_000733925_00801 | GCA_000733925_00802 | GCA_000733925_00801 | Unannotated protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Unannotated protein. | 0.900 |
aroA | dtd | GCA_000733925_00802 | GCA_000733925_00800 | Unannotated protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Unannotated protein; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | 0.665 |
aroA | rsgA | GCA_000733925_00802 | GCA_000733925_00799 | Unannotated protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Unannotated protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.664 |
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