Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000733925_00967 | GCA_000733925_00968 | GCA_000733925_00967 | GCA_000733925_00968 | Unannotated protein. | Unannotated protein. | 0.520 |
GCA_000733925_00967 | lgt | GCA_000733925_00967 | GCA_000733925_00969 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.500 |
GCA_000733925_00967 | ylmA | GCA_000733925_00967 | GCA_000733925_00966 | Unannotated protein. | Unannotated protein. | 0.580 |
GCA_000733925_00968 | GCA_000733925_00967 | GCA_000733925_00968 | GCA_000733925_00967 | Unannotated protein. | Unannotated protein. | 0.520 |
GCA_000733925_00968 | lgt | GCA_000733925_00968 | GCA_000733925_00969 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.839 |
GCA_000733925_00968 | ylmA | GCA_000733925_00968 | GCA_000733925_00966 | Unannotated protein. | Unannotated protein. | 0.464 |
cysA | cysT | GCA_000733925_00791 | GCA_000733925_00790 | Unannotated protein. | Unannotated protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.998 |
cysA | modA | GCA_000733925_00791 | GCA_000733925_00788 | Unannotated protein. | Unannotated protein. | 0.988 |
cysA | ylmA | GCA_000733925_00791 | GCA_000733925_00966 | Unannotated protein. | Unannotated protein. | 0.800 |
cysT | cysA | GCA_000733925_00790 | GCA_000733925_00791 | Unannotated protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Unannotated protein. | 0.998 |
cysT | modA | GCA_000733925_00790 | GCA_000733925_00788 | Unannotated protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Unannotated protein. | 0.999 |
cysT | ylmA | GCA_000733925_00790 | GCA_000733925_00966 | Unannotated protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Unannotated protein. | 0.800 |
ilvC | ylmA | GCA_000733925_02365 | GCA_000733925_00966 | Unannotated protein; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | Unannotated protein. | 0.658 |
lgt | GCA_000733925_00967 | GCA_000733925_00969 | GCA_000733925_00967 | Unannotated protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Unannotated protein. | 0.500 |
lgt | GCA_000733925_00968 | GCA_000733925_00969 | GCA_000733925_00968 | Unannotated protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Unannotated protein. | 0.839 |
lgt | ylmA | GCA_000733925_00969 | GCA_000733925_00966 | Unannotated protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Unannotated protein. | 0.458 |
modA | cysA | GCA_000733925_00788 | GCA_000733925_00791 | Unannotated protein. | Unannotated protein. | 0.988 |
modA | cysT | GCA_000733925_00788 | GCA_000733925_00790 | Unannotated protein. | Unannotated protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.999 |
modA | ylmA | GCA_000733925_00788 | GCA_000733925_00966 | Unannotated protein. | Unannotated protein. | 0.800 |
ylmA | GCA_000733925_00967 | GCA_000733925_00966 | GCA_000733925_00967 | Unannotated protein. | Unannotated protein. | 0.580 |
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