rpsT protein (Arenibacter algicola) - STRING interaction network

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second shell of interactors

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Predicted Interactions

gene neighborhood

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Score

rpsT

Unannotated protein; Binds directly to 16S ribosomal RNA. (83 aa)

Predicted Functional Partners:

rpsU

0.993

rpmF

0.993

rpsP

0.991

rplM

0.991

rpsO

0.991

rpmE2

0.991

rpmB

0.991

rpmA

0.991

rplU

0.991

rpsB

0.990

Your Current Organism:

Arenibacter algicola

NCBI taxonomy Id: 616991
Other names: A. algicola, ATCC BAA-2265, Arenibacter sp. TG409, DSM 24761, strain TG409

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplU	GCA_000733925_00544	GCA_000733925_04009	Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Unannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.993
rplM	rpmA	GCA_000733925_00544	GCA_000733925_04008	Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Unannotated protein; Belongs to the bacterial ribosomal protein bL27 family.	0.995
rplM	rpmB	GCA_000733925_00544	GCA_000733925_03129	Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Unannotated protein; Belongs to the bacterial ribosomal protein bL28 family.	0.991
rplM	rpmE2	GCA_000733925_00544	GCA_000733925_02178	Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Unannotated protein; Belongs to the bacterial ribosomal protein bL31 family.	0.990
rplM	rpmF	GCA_000733925_00544	GCA_000733925_04346	Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Unannotated protein; Belongs to the bacterial ribosomal protein bL32 family.	0.990
rplM	rpsB	GCA_000733925_00544	GCA_000733925_00542	Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Unannotated protein; Belongs to the universal ribosomal protein uS2 family.	0.999
rplM	rpsO	GCA_000733925_00544	GCA_000733925_00857	Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Unannotated protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.996
rplM	rpsP	GCA_000733925_00544	GCA_000733925_00280	Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Unannotated protein; Belongs to the bacterial ribosomal protein bS16 family.	0.995
rplM	rpsT	GCA_000733925_00544	GCA_000733925_00981	Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Unannotated protein; Binds directly to 16S ribosomal RNA.	0.991
rplM	rpsU	GCA_000733925_00544	GCA_000733925_03178	Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Unannotated protein; Belongs to the bacterial ribosomal protein bS21 family.	0.990
rplU	rplM	GCA_000733925_04009	GCA_000733925_00544	Unannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.993
rplU	rpmA	GCA_000733925_04009	GCA_000733925_04008	Unannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Unannotated protein; Belongs to the bacterial ribosomal protein bL27 family.	0.999
rplU	rpmB	GCA_000733925_04009	GCA_000733925_03129	Unannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Unannotated protein; Belongs to the bacterial ribosomal protein bL28 family.	0.991
rplU	rpmE2	GCA_000733925_04009	GCA_000733925_02178	Unannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Unannotated protein; Belongs to the bacterial ribosomal protein bL31 family.	0.991
rplU	rpmF	GCA_000733925_04009	GCA_000733925_04346	Unannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Unannotated protein; Belongs to the bacterial ribosomal protein bL32 family.	0.991
rplU	rpsB	GCA_000733925_04009	GCA_000733925_00542	Unannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Unannotated protein; Belongs to the universal ribosomal protein uS2 family.	0.991
rplU	rpsO	GCA_000733925_04009	GCA_000733925_00857	Unannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Unannotated protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.994
rplU	rpsP	GCA_000733925_04009	GCA_000733925_00280	Unannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Unannotated protein; Belongs to the bacterial ribosomal protein bS16 family.	0.993
rplU	rpsT	GCA_000733925_04009	GCA_000733925_00981	Unannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Unannotated protein; Binds directly to 16S ribosomal RNA.	0.991
rplU	rpsU	GCA_000733925_04009	GCA_000733925_03178	Unannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Unannotated protein; Belongs to the bacterial ribosomal protein bS21 family.	0.990