Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000733925_01658 | GCA_000733925_01659 | GCA_000733925_01658 | GCA_000733925_01659 | Unannotated protein. | Unannotated protein. | 0.563 |
GCA_000733925_01658 | GCA_000733925_02643 | GCA_000733925_01658 | GCA_000733925_02643 | Unannotated protein. | Unannotated protein. | 0.452 |
GCA_000733925_01658 | kduI | GCA_000733925_01658 | GCA_000733925_00846 | Unannotated protein. | Unannotated protein; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 0.452 |
GCA_000733925_01658 | lepB | GCA_000733925_01658 | GCA_000733925_01021 | Unannotated protein. | Unannotated protein; Belongs to the peptidase S26 family. | 0.450 |
GCA_000733925_01658 | rlmF | GCA_000733925_01658 | GCA_000733925_01940 | Unannotated protein. | Unannotated protein; Specifically methylates the adenine in position 1618 of 23S rRNA. | 0.538 |
GCA_000733925_01659 | GCA_000733925_01658 | GCA_000733925_01659 | GCA_000733925_01658 | Unannotated protein. | Unannotated protein. | 0.563 |
GCA_000733925_02643 | GCA_000733925_01658 | GCA_000733925_02643 | GCA_000733925_01658 | Unannotated protein. | Unannotated protein. | 0.452 |
GCA_000733925_02643 | kduI | GCA_000733925_02643 | GCA_000733925_00846 | Unannotated protein. | Unannotated protein; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 0.650 |
GCA_000733925_02643 | lepB | GCA_000733925_02643 | GCA_000733925_01021 | Unannotated protein. | Unannotated protein; Belongs to the peptidase S26 family. | 0.442 |
kduI | GCA_000733925_01658 | GCA_000733925_00846 | GCA_000733925_01658 | Unannotated protein; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | Unannotated protein. | 0.452 |
kduI | GCA_000733925_02643 | GCA_000733925_00846 | GCA_000733925_02643 | Unannotated protein; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | Unannotated protein. | 0.650 |
kduI | lepB | GCA_000733925_00846 | GCA_000733925_01021 | Unannotated protein; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | Unannotated protein; Belongs to the peptidase S26 family. | 0.449 |
lepB | GCA_000733925_01658 | GCA_000733925_01021 | GCA_000733925_01658 | Unannotated protein; Belongs to the peptidase S26 family. | Unannotated protein. | 0.450 |
lepB | GCA_000733925_02643 | GCA_000733925_01021 | GCA_000733925_02643 | Unannotated protein; Belongs to the peptidase S26 family. | Unannotated protein. | 0.442 |
lepB | kduI | GCA_000733925_01021 | GCA_000733925_00846 | Unannotated protein; Belongs to the peptidase S26 family. | Unannotated protein; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 0.449 |
rlmF | GCA_000733925_01658 | GCA_000733925_01940 | GCA_000733925_01658 | Unannotated protein; Specifically methylates the adenine in position 1618 of 23S rRNA. | Unannotated protein. | 0.538 |