STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000733925_01776Unannotated protein. (470 aa)    
Predicted Functional Partners:
GCA_000733925_02502
Unannotated protein; Belongs to the alkaline phosphatase family.
 
 
 0.960
GCA_000733925_01844
Unannotated protein.
  
  
  0.936
folB
Unannotated protein; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
 0.909
folE
Unannotated protein.
    
 0.904
folE-2
Unannotated protein.
    
 0.904
folE-3
Unannotated protein.
    
 0.904
queD
Unannotated protein.
     
  0.900
GCA_000733925_04184
Unannotated protein.
     
  0.900
GCA_000733925_03074
Unannotated protein.
  
     0.619
GCA_000733925_01775
Unannotated protein.
       0.588
Your Current Organism:
Arenibacter algicola
NCBI taxonomy Id: 616991
Other names: A. algicola, ATCC BAA-2265, Arenibacter sp. TG409, DSM 24761, strain TG409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.