STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000733925_01964Unannotated protein. (152 aa)    
Predicted Functional Partners:
GCA_000733925_01965
Unannotated protein.
     0.963
GCA_000733925_04541
Unannotated protein.
  
     0.772
GCA_000733925_01162
Unannotated protein.
  
     0.766
GCA_000733925_02914
Unannotated protein.
  
     0.755
GCA_000733925_04069
Unannotated protein.
  
     0.755
GCA_000733925_00975
Unannotated protein.
  
     0.752
GCA_000733925_02904
Unannotated protein.
  
     0.752
GCA_000733925_01962
Unannotated protein.
 
     0.751
GCA_000733925_00533
Unannotated protein.
  
     0.748
GCA_000733925_04146
Unannotated protein.
  
     0.747
Your Current Organism:
Arenibacter algicola
NCBI taxonomy Id: 616991
Other names: A. algicola, ATCC BAA-2265, Arenibacter sp. TG409, DSM 24761, strain TG409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.