Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000733925_02387 | GCA_000733925_02388 | GCA_000733925_02387 | GCA_000733925_02388 | Unannotated protein. | Unannotated protein. | 0.605 |
GCA_000733925_02387 | GCA_000733925_02391 | GCA_000733925_02387 | GCA_000733925_02391 | Unannotated protein. | Unannotated protein. | 0.401 |
GCA_000733925_02387 | entC | GCA_000733925_02387 | GCA_000733925_02389 | Unannotated protein. | Unannotated protein. | 0.662 |
GCA_000733925_02387 | menD | GCA_000733925_02387 | GCA_000733925_02390 | Unannotated protein. | Unannotated protein; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.489 |
GCA_000733925_02388 | GCA_000733925_02387 | GCA_000733925_02388 | GCA_000733925_02387 | Unannotated protein. | Unannotated protein. | 0.605 |
GCA_000733925_02388 | GCA_000733925_02391 | GCA_000733925_02388 | GCA_000733925_02391 | Unannotated protein. | Unannotated protein. | 0.562 |
GCA_000733925_02388 | GCA_000733925_02392 | GCA_000733925_02388 | GCA_000733925_02392 | Unannotated protein. | Unannotated protein; Belongs to the CvfB family. | 0.434 |
GCA_000733925_02388 | entC | GCA_000733925_02388 | GCA_000733925_02389 | Unannotated protein. | Unannotated protein. | 0.905 |
GCA_000733925_02388 | menA | GCA_000733925_02388 | GCA_000733925_02394 | Unannotated protein. | Unannotated protein. | 0.972 |
GCA_000733925_02388 | menB | GCA_000733925_02388 | GCA_000733925_02493 | Unannotated protein. | Unannotated protein; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | 0.974 |
GCA_000733925_02388 | menD | GCA_000733925_02388 | GCA_000733925_02390 | Unannotated protein. | Unannotated protein; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.908 |
GCA_000733925_02388 | menE | GCA_000733925_02388 | GCA_000733925_02159 | Unannotated protein. | Unannotated protein. | 0.660 |
GCA_000733925_02388 | ykfB | GCA_000733925_02388 | GCA_000733925_02157 | Unannotated protein. | Unannotated protein. | 0.437 |
GCA_000733925_02391 | GCA_000733925_02387 | GCA_000733925_02391 | GCA_000733925_02387 | Unannotated protein. | Unannotated protein. | 0.401 |
GCA_000733925_02391 | GCA_000733925_02388 | GCA_000733925_02391 | GCA_000733925_02388 | Unannotated protein. | Unannotated protein. | 0.562 |
GCA_000733925_02391 | GCA_000733925_02392 | GCA_000733925_02391 | GCA_000733925_02392 | Unannotated protein. | Unannotated protein; Belongs to the CvfB family. | 0.598 |
GCA_000733925_02391 | entC | GCA_000733925_02391 | GCA_000733925_02389 | Unannotated protein. | Unannotated protein. | 0.562 |
GCA_000733925_02391 | menD | GCA_000733925_02391 | GCA_000733925_02390 | Unannotated protein. | Unannotated protein; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.727 |
GCA_000733925_02392 | GCA_000733925_02388 | GCA_000733925_02392 | GCA_000733925_02388 | Unannotated protein; Belongs to the CvfB family. | Unannotated protein. | 0.434 |
GCA_000733925_02392 | GCA_000733925_02391 | GCA_000733925_02392 | GCA_000733925_02391 | Unannotated protein; Belongs to the CvfB family. | Unannotated protein. | 0.598 |
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