Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000733925_00257 | GCA_000733925_01200 | GCA_000733925_00257 | GCA_000733925_01200 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein. | 0.588 |
GCA_000733925_00257 | GCA_000733925_03518 | GCA_000733925_00257 | GCA_000733925_03518 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein. | 0.666 |
GCA_000733925_00257 | serC | GCA_000733925_00257 | GCA_000733925_02429 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.969 |
GCA_000733925_00257 | thrC | GCA_000733925_00257 | GCA_000733925_01198 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein. | 0.474 |
GCA_000733925_01200 | GCA_000733925_00257 | GCA_000733925_01200 | GCA_000733925_00257 | Unannotated protein. | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.588 |
GCA_000733925_01200 | GCA_000733925_02007 | GCA_000733925_01200 | GCA_000733925_02007 | Unannotated protein. | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.588 |
GCA_000733925_01200 | GCA_000733925_02428 | GCA_000733925_01200 | GCA_000733925_02428 | Unannotated protein. | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.588 |
GCA_000733925_01200 | GCA_000733925_03518 | GCA_000733925_01200 | GCA_000733925_03518 | Unannotated protein. | Unannotated protein. | 0.993 |
GCA_000733925_01200 | aroA | GCA_000733925_01200 | GCA_000733925_00802 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.607 |
GCA_000733925_01200 | aroF | GCA_000733925_01200 | GCA_000733925_00796 | Unannotated protein. | Unannotated protein. | 0.617 |
GCA_000733925_01200 | pheA | GCA_000733925_01200 | GCA_000733925_00793 | Unannotated protein. | Unannotated protein. | 0.717 |
GCA_000733925_01200 | serA | GCA_000733925_01200 | GCA_000733925_02897 | Unannotated protein. | Unannotated protein; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.821 |
GCA_000733925_01200 | serC | GCA_000733925_01200 | GCA_000733925_02429 | Unannotated protein. | Unannotated protein; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.616 |
GCA_000733925_01200 | thrC | GCA_000733925_01200 | GCA_000733925_01198 | Unannotated protein. | Unannotated protein. | 0.994 |
GCA_000733925_02007 | GCA_000733925_01200 | GCA_000733925_02007 | GCA_000733925_01200 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein. | 0.588 |
GCA_000733925_02007 | GCA_000733925_03518 | GCA_000733925_02007 | GCA_000733925_03518 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein. | 0.666 |
GCA_000733925_02007 | serC | GCA_000733925_02007 | GCA_000733925_02429 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.970 |
GCA_000733925_02007 | thrC | GCA_000733925_02007 | GCA_000733925_01198 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein. | 0.474 |
GCA_000733925_02428 | GCA_000733925_01200 | GCA_000733925_02428 | GCA_000733925_01200 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein. | 0.588 |
GCA_000733925_02428 | GCA_000733925_03518 | GCA_000733925_02428 | GCA_000733925_03518 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein. | 0.666 |
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