Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000733925_01041 | GCA_000733925_01050 | GCA_000733925_01041 | GCA_000733925_01050 | Unannotated protein. | Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.945 |
GCA_000733925_01041 | GCA_000733925_01062 | GCA_000733925_01041 | GCA_000733925_01062 | Unannotated protein. | Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.885 |
GCA_000733925_01041 | GCA_000733925_02077 | GCA_000733925_01041 | GCA_000733925_02077 | Unannotated protein. | Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.902 |
GCA_000733925_01041 | GCA_000733925_02459 | GCA_000733925_01041 | GCA_000733925_02459 | Unannotated protein. | Unannotated protein; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.928 |
GCA_000733925_01041 | GCA_000733925_02657 | GCA_000733925_01041 | GCA_000733925_02657 | Unannotated protein. | Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.614 |
GCA_000733925_01041 | GCA_000733925_03543 | GCA_000733925_01041 | GCA_000733925_03543 | Unannotated protein. | Unannotated protein. | 0.928 |
GCA_000733925_01041 | fabD | GCA_000733925_01041 | GCA_000733925_00602 | Unannotated protein. | Unannotated protein. | 0.671 |
GCA_000733925_01041 | fabI | GCA_000733925_01041 | GCA_000733925_02834 | Unannotated protein. | Unannotated protein. | 0.935 |
GCA_000733925_01041 | fabZ | GCA_000733925_01041 | GCA_000733925_02658 | Unannotated protein. | Unannotated protein. | 0.900 |
GCA_000733925_01041 | lpxC | GCA_000733925_01041 | GCA_000733925_02454 | Unannotated protein. | Unannotated protein; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily. | 0.916 |
GCA_000733925_01050 | GCA_000733925_01041 | GCA_000733925_01050 | GCA_000733925_01041 | Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Unannotated protein. | 0.945 |
GCA_000733925_01050 | GCA_000733925_01062 | GCA_000733925_01050 | GCA_000733925_01062 | Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.952 |
GCA_000733925_01050 | GCA_000733925_02077 | GCA_000733925_01050 | GCA_000733925_02077 | Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.900 |
GCA_000733925_01050 | GCA_000733925_02459 | GCA_000733925_01050 | GCA_000733925_02459 | Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Unannotated protein; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.952 |
GCA_000733925_01050 | GCA_000733925_02657 | GCA_000733925_01050 | GCA_000733925_02657 | Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.926 |
GCA_000733925_01050 | GCA_000733925_03543 | GCA_000733925_01050 | GCA_000733925_03543 | Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Unannotated protein. | 0.934 |
GCA_000733925_01050 | fabD | GCA_000733925_01050 | GCA_000733925_00602 | Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Unannotated protein. | 0.984 |
GCA_000733925_01050 | fabI | GCA_000733925_01050 | GCA_000733925_02834 | Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Unannotated protein. | 0.960 |
GCA_000733925_01050 | fabZ | GCA_000733925_01050 | GCA_000733925_02658 | Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Unannotated protein. | 0.686 |
GCA_000733925_01050 | lpxC | GCA_000733925_01050 | GCA_000733925_02454 | Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Unannotated protein; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily. | 0.722 |
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