STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000733925_02836Unannotated protein. (296 aa)    
Predicted Functional Partners:
GCA_000733925_02838
Unannotated protein.
 
     0.928
GCA_000733925_02839
Unannotated protein.
 
     0.928
coaBC
Unannotated protein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.
 
     0.854
GCA_000733925_00572
Unannotated protein.
  
     0.770
GCA_000733925_03575
Unannotated protein.
  
     0.762
GCA_000733925_03292
Unannotated protein.
  
     0.750
GCA_000733925_00781
Unannotated protein.
  
     0.724
recN
Unannotated protein; May be involved in recombinational repair of damaged DNA.
 
     0.710
GCA_000733925_04012
Unannotated protein.
  
     0.695
GCA_000733925_00810
Unannotated protein.
  
     0.671
Your Current Organism:
Arenibacter algicola
NCBI taxonomy Id: 616991
Other names: A. algicola, ATCC BAA-2265, Arenibacter sp. TG409, DSM 24761, strain TG409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.