Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000733925_02836 | GCA_000733925_02838 | GCA_000733925_02836 | GCA_000733925_02838 | Unannotated protein. | Unannotated protein. | 0.928 |
GCA_000733925_02836 | GCA_000733925_02839 | GCA_000733925_02836 | GCA_000733925_02839 | Unannotated protein. | Unannotated protein. | 0.928 |
GCA_000733925_02838 | GCA_000733925_02836 | GCA_000733925_02838 | GCA_000733925_02836 | Unannotated protein. | Unannotated protein. | 0.928 |
GCA_000733925_02838 | GCA_000733925_02839 | GCA_000733925_02838 | GCA_000733925_02839 | Unannotated protein. | Unannotated protein. | 0.948 |
GCA_000733925_02838 | nusA | GCA_000733925_02838 | GCA_000733925_00554 | Unannotated protein. | Unannotated protein; Participates in both transcription termination and antitermination. | 0.951 |
GCA_000733925_02838 | rplF | GCA_000733925_02838 | GCA_000733925_03455 | Unannotated protein. | Unannotated protein; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.958 |
GCA_000733925_02838 | rplJ | GCA_000733925_02838 | GCA_000733925_03165 | Unannotated protein. | Unannotated protein; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.920 |
GCA_000733925_02838 | rpoA | GCA_000733925_02838 | GCA_000733925_03444 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.996 |
GCA_000733925_02838 | rpoB | GCA_000733925_02838 | GCA_000733925_03163 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.992 |
GCA_000733925_02838 | rpoC | GCA_000733925_02838 | GCA_000733925_03162 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.984 |
GCA_000733925_02838 | rpoN | GCA_000733925_02838 | GCA_000733925_00535 | Unannotated protein. | Unannotated protein. | 0.906 |
GCA_000733925_02838 | rpsB | GCA_000733925_02838 | GCA_000733925_00542 | Unannotated protein. | Unannotated protein; Belongs to the universal ribosomal protein uS2 family. | 0.913 |
GCA_000733925_02839 | GCA_000733925_02836 | GCA_000733925_02839 | GCA_000733925_02836 | Unannotated protein. | Unannotated protein. | 0.928 |
GCA_000733925_02839 | GCA_000733925_02838 | GCA_000733925_02839 | GCA_000733925_02838 | Unannotated protein. | Unannotated protein. | 0.948 |
nusA | GCA_000733925_02838 | GCA_000733925_00554 | GCA_000733925_02838 | Unannotated protein; Participates in both transcription termination and antitermination. | Unannotated protein. | 0.951 |
nusA | rplF | GCA_000733925_00554 | GCA_000733925_03455 | Unannotated protein; Participates in both transcription termination and antitermination. | Unannotated protein; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.926 |
nusA | rplJ | GCA_000733925_00554 | GCA_000733925_03165 | Unannotated protein; Participates in both transcription termination and antitermination. | Unannotated protein; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.936 |
nusA | rpoA | GCA_000733925_00554 | GCA_000733925_03444 | Unannotated protein; Participates in both transcription termination and antitermination. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.995 |
nusA | rpoB | GCA_000733925_00554 | GCA_000733925_03163 | Unannotated protein; Participates in both transcription termination and antitermination. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.994 |
nusA | rpoC | GCA_000733925_00554 | GCA_000733925_03162 | Unannotated protein; Participates in both transcription termination and antitermination. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.993 |
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