Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000733925_00730 | fabD | GCA_000733925_00730 | GCA_000733925_00602 | Unannotated protein. | Unannotated protein. | 0.920 |
GCA_000733925_00730 | ybgC | GCA_000733925_00730 | GCA_000733925_02860 | Unannotated protein. | Unannotated protein. | 0.489 |
GCA_000733925_01048 | GCA_000733925_01061 | GCA_000733925_01048 | GCA_000733925_01061 | Unannotated protein. | Unannotated protein. | 0.982 |
GCA_000733925_01048 | fabD | GCA_000733925_01048 | GCA_000733925_00602 | Unannotated protein. | Unannotated protein. | 0.863 |
GCA_000733925_01048 | ybgC | GCA_000733925_01048 | GCA_000733925_02860 | Unannotated protein. | Unannotated protein. | 0.412 |
GCA_000733925_01061 | GCA_000733925_01048 | GCA_000733925_01061 | GCA_000733925_01048 | Unannotated protein. | Unannotated protein. | 0.982 |
GCA_000733925_01061 | fabD | GCA_000733925_01061 | GCA_000733925_00602 | Unannotated protein. | Unannotated protein. | 0.869 |
GCA_000733925_01061 | ybgC | GCA_000733925_01061 | GCA_000733925_02860 | Unannotated protein. | Unannotated protein. | 0.412 |
GCA_000733925_01551 | fabD | GCA_000733925_01551 | GCA_000733925_00602 | Unannotated protein. | Unannotated protein. | 0.863 |
GCA_000733925_01551 | ybgC | GCA_000733925_01551 | GCA_000733925_02860 | Unannotated protein. | Unannotated protein. | 0.412 |
GCA_000733925_02863 | dnaA | GCA_000733925_02863 | GCA_000733925_02861 | Unannotated protein. | Unannotated protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.801 |
GCA_000733925_02863 | ybgC | GCA_000733925_02863 | GCA_000733925_02860 | Unannotated protein. | Unannotated protein. | 0.572 |
GCA_000733925_02863 | yfkJ | GCA_000733925_02863 | GCA_000733925_02862 | Unannotated protein. | Unannotated protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.820 |
GCA_000733925_04698 | ybgC | GCA_000733925_04698 | GCA_000733925_02860 | Unannotated protein; Belongs to the UPF0403 family. | Unannotated protein. | 0.413 |
dnaA | GCA_000733925_02863 | GCA_000733925_02861 | GCA_000733925_02863 | Unannotated protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | Unannotated protein. | 0.801 |
dnaA | ybgC | GCA_000733925_02861 | GCA_000733925_02860 | Unannotated protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | Unannotated protein. | 0.656 |
dnaA | yfkJ | GCA_000733925_02861 | GCA_000733925_02862 | Unannotated protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | Unannotated protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.813 |
fabD | GCA_000733925_00730 | GCA_000733925_00602 | GCA_000733925_00730 | Unannotated protein. | Unannotated protein. | 0.920 |
fabD | GCA_000733925_01048 | GCA_000733925_00602 | GCA_000733925_01048 | Unannotated protein. | Unannotated protein. | 0.863 |
fabD | GCA_000733925_01061 | GCA_000733925_00602 | GCA_000733925_01061 | Unannotated protein. | Unannotated protein. | 0.869 |
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