Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000733925_02693 | rebM | GCA_000733925_02693 | GCA_000733925_03283 | Unannotated protein. | Unannotated protein. | 0.561 |
GCA_000733925_02974 | GCA_000733925_03044 | GCA_000733925_02974 | GCA_000733925_03044 | Unannotated protein. | Unannotated protein. | 0.527 |
GCA_000733925_02974 | rebM | GCA_000733925_02974 | GCA_000733925_03283 | Unannotated protein. | Unannotated protein. | 0.455 |
GCA_000733925_03044 | GCA_000733925_02974 | GCA_000733925_03044 | GCA_000733925_02974 | Unannotated protein. | Unannotated protein. | 0.527 |
GCA_000733925_03044 | rebM | GCA_000733925_03044 | GCA_000733925_03283 | Unannotated protein. | Unannotated protein. | 0.521 |
GCA_000733925_04514 | GCA_000733925_04532 | GCA_000733925_04514 | GCA_000733925_04532 | Unannotated protein. | Unannotated protein. | 0.439 |
GCA_000733925_04514 | rebM | GCA_000733925_04514 | GCA_000733925_03283 | Unannotated protein. | Unannotated protein. | 0.543 |
GCA_000733925_04532 | GCA_000733925_04514 | GCA_000733925_04532 | GCA_000733925_04514 | Unannotated protein. | Unannotated protein. | 0.439 |
GCA_000733925_04532 | rebM | GCA_000733925_04532 | GCA_000733925_03283 | Unannotated protein. | Unannotated protein. | 0.475 |
epsH | rebM | GCA_000733925_02833 | GCA_000733925_03283 | Unannotated protein. | Unannotated protein. | 0.524 |
gpmI | map | GCA_000733925_03281 | GCA_000733925_03282 | Unannotated protein; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | Unannotated protein; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.637 |
gpmI | rebM | GCA_000733925_03281 | GCA_000733925_03283 | Unannotated protein; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | Unannotated protein. | 0.502 |
map | gpmI | GCA_000733925_03282 | GCA_000733925_03281 | Unannotated protein; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Unannotated protein; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.637 |
map | rebM | GCA_000733925_03282 | GCA_000733925_03283 | Unannotated protein; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Unannotated protein. | 0.525 |
ptlI | rebM | GCA_000733925_00568 | GCA_000733925_03283 | Unannotated protein; Belongs to the cytochrome P450 family. | Unannotated protein. | 0.424 |
rebM | GCA_000733925_02693 | GCA_000733925_03283 | GCA_000733925_02693 | Unannotated protein. | Unannotated protein. | 0.561 |
rebM | GCA_000733925_02974 | GCA_000733925_03283 | GCA_000733925_02974 | Unannotated protein. | Unannotated protein. | 0.455 |
rebM | GCA_000733925_03044 | GCA_000733925_03283 | GCA_000733925_03044 | Unannotated protein. | Unannotated protein. | 0.521 |
rebM | GCA_000733925_04514 | GCA_000733925_03283 | GCA_000733925_04514 | Unannotated protein. | Unannotated protein. | 0.543 |
rebM | GCA_000733925_04532 | GCA_000733925_03283 | GCA_000733925_04532 | Unannotated protein. | Unannotated protein. | 0.475 |
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