Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000733925_03532 | carE | GCA_000733925_03532 | GCA_000733925_03531 | Unannotated protein. | Unannotated protein. | 0.657 |
GCA_000733925_03532 | etfB | GCA_000733925_03532 | GCA_000733925_03530 | Unannotated protein. | Unannotated protein. | 0.521 |
GCA_000733925_03532 | flA | GCA_000733925_03532 | GCA_000733925_01634 | Unannotated protein. | Unannotated protein. | 0.507 |
GCA_000733925_03532 | nupX | GCA_000733925_03532 | GCA_000733925_03533 | Unannotated protein. | Unannotated protein. | 0.772 |
GCA_000733925_03532 | thyA2 | GCA_000733925_03532 | GCA_000733925_03534 | Unannotated protein. | Unannotated protein; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.476 |
carE | GCA_000733925_03532 | GCA_000733925_03531 | GCA_000733925_03532 | Unannotated protein. | Unannotated protein. | 0.657 |
carE | etfB | GCA_000733925_03531 | GCA_000733925_03530 | Unannotated protein. | Unannotated protein. | 0.999 |
carE | nupX | GCA_000733925_03531 | GCA_000733925_03533 | Unannotated protein. | Unannotated protein. | 0.550 |
etfB | GCA_000733925_03532 | GCA_000733925_03530 | GCA_000733925_03532 | Unannotated protein. | Unannotated protein. | 0.521 |
etfB | carE | GCA_000733925_03530 | GCA_000733925_03531 | Unannotated protein. | Unannotated protein. | 0.999 |
etfB | nupX | GCA_000733925_03530 | GCA_000733925_03533 | Unannotated protein. | Unannotated protein. | 0.407 |
flA | GCA_000733925_03532 | GCA_000733925_01634 | GCA_000733925_03532 | Unannotated protein. | Unannotated protein. | 0.507 |
nupX | GCA_000733925_03532 | GCA_000733925_03533 | GCA_000733925_03532 | Unannotated protein. | Unannotated protein. | 0.772 |
nupX | carE | GCA_000733925_03533 | GCA_000733925_03531 | Unannotated protein. | Unannotated protein. | 0.550 |
nupX | etfB | GCA_000733925_03533 | GCA_000733925_03530 | Unannotated protein. | Unannotated protein. | 0.407 |
nupX | thyA2 | GCA_000733925_03533 | GCA_000733925_03534 | Unannotated protein. | Unannotated protein; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.585 |
thyA2 | GCA_000733925_03532 | GCA_000733925_03534 | GCA_000733925_03532 | Unannotated protein; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | Unannotated protein. | 0.476 |
thyA2 | nupX | GCA_000733925_03534 | GCA_000733925_03533 | Unannotated protein; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | Unannotated protein. | 0.585 |