Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000733925_03832 | comEC | GCA_000733925_03832 | GCA_000733925_03835 | Unannotated protein. | Unannotated protein. | 0.434 |
GCA_000733925_03832 | lpxB | GCA_000733925_03832 | GCA_000733925_03833 | Unannotated protein. | Unannotated protein; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.685 |
GCA_000733925_03832 | mepS | GCA_000733925_03832 | GCA_000733925_03834 | Unannotated protein. | Unannotated protein. | 0.508 |
GCA_000733925_03832 | surE | GCA_000733925_03832 | GCA_000733925_03831 | Unannotated protein. | Unannotated protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.832 |
comEC | GCA_000733925_03832 | GCA_000733925_03835 | GCA_000733925_03832 | Unannotated protein. | Unannotated protein. | 0.434 |
comEC | lpxB | GCA_000733925_03835 | GCA_000733925_03833 | Unannotated protein. | Unannotated protein; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.591 |
comEC | mepS | GCA_000733925_03835 | GCA_000733925_03834 | Unannotated protein. | Unannotated protein. | 0.831 |
comEC | surE | GCA_000733925_03835 | GCA_000733925_03831 | Unannotated protein. | Unannotated protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.453 |
lpxB | GCA_000733925_03832 | GCA_000733925_03833 | GCA_000733925_03832 | Unannotated protein; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | Unannotated protein. | 0.685 |
lpxB | comEC | GCA_000733925_03833 | GCA_000733925_03835 | Unannotated protein; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | Unannotated protein. | 0.591 |
lpxB | mepS | GCA_000733925_03833 | GCA_000733925_03834 | Unannotated protein; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | Unannotated protein. | 0.587 |
lpxB | surE | GCA_000733925_03833 | GCA_000733925_03831 | Unannotated protein; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | Unannotated protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.692 |
mepS | GCA_000733925_03832 | GCA_000733925_03834 | GCA_000733925_03832 | Unannotated protein. | Unannotated protein. | 0.508 |
mepS | comEC | GCA_000733925_03834 | GCA_000733925_03835 | Unannotated protein. | Unannotated protein. | 0.831 |
mepS | lpxB | GCA_000733925_03834 | GCA_000733925_03833 | Unannotated protein. | Unannotated protein; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.587 |
mepS | surE | GCA_000733925_03834 | GCA_000733925_03831 | Unannotated protein. | Unannotated protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.563 |
mepS | ykfC | GCA_000733925_03834 | GCA_000733925_01206 | Unannotated protein. | Unannotated protein. | 0.564 |
surE | GCA_000733925_03832 | GCA_000733925_03831 | GCA_000733925_03832 | Unannotated protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | Unannotated protein. | 0.832 |
surE | comEC | GCA_000733925_03831 | GCA_000733925_03835 | Unannotated protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | Unannotated protein. | 0.453 |
surE | lpxB | GCA_000733925_03831 | GCA_000733925_03833 | Unannotated protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | Unannotated protein; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.692 |
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