STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hlyDUnannotated protein. (432 aa)    
Predicted Functional Partners:
lagD
Unannotated protein.
 
 
 0.979
GCA_000733925_04196
Unannotated protein.
 
     0.868
GCA_000733925_00748
Unannotated protein.
 
 
 0.605
GCA_000733925_00496
Unannotated protein.
  
 
 0.591
GCA_000733925_00723
Unannotated protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 
 0.568
GCA_000733925_02381
Unannotated protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 
 0.568
GCA_000733925_04197
Unannotated protein.
       0.543
GCA_000733925_01880
Unannotated protein.
  
 
 0.541
GCA_000733925_00592
Unannotated protein.
  
 
 0.513
GCA_000733925_00018
Unannotated protein.
  
 
 0.508
Your Current Organism:
Arenibacter algicola
NCBI taxonomy Id: 616991
Other names: A. algicola, ATCC BAA-2265, Arenibacter sp. TG409, DSM 24761, strain TG409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.