Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000733925_03921 | ytnP | GCA_000733925_03921 | GCA_000733925_04493 | Unannotated protein. | Unannotated protein. | 0.576 |
GCA_000733925_04492 | ytnP | GCA_000733925_04492 | GCA_000733925_04493 | Unannotated protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | Unannotated protein. | 0.570 |
GCA_000733925_04495 | wprA | GCA_000733925_04495 | GCA_000733925_04494 | Unannotated protein. | Unannotated protein; Belongs to the peptidase S8 family. | 0.795 |
GCA_000733925_04495 | ytnP | GCA_000733925_04495 | GCA_000733925_04493 | Unannotated protein. | Unannotated protein. | 0.535 |
moeZ | ybeY | GCA_000733925_02513 | GCA_000733925_04530 | Unannotated protein. | Unannotated protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.521 |
moeZ | ytnP | GCA_000733925_02513 | GCA_000733925_04493 | Unannotated protein. | Unannotated protein. | 0.475 |
rsmH | ybeY | GCA_000733925_00816 | GCA_000733925_04530 | Unannotated protein; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | Unannotated protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.488 |
rsmH | ytnP | GCA_000733925_00816 | GCA_000733925_04493 | Unannotated protein; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | Unannotated protein. | 0.400 |
wprA | GCA_000733925_04495 | GCA_000733925_04494 | GCA_000733925_04495 | Unannotated protein; Belongs to the peptidase S8 family. | Unannotated protein. | 0.795 |
wprA | ytnP | GCA_000733925_04494 | GCA_000733925_04493 | Unannotated protein; Belongs to the peptidase S8 family. | Unannotated protein. | 0.634 |
ybeY | moeZ | GCA_000733925_04530 | GCA_000733925_02513 | Unannotated protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | Unannotated protein. | 0.521 |
ybeY | rsmH | GCA_000733925_04530 | GCA_000733925_00816 | Unannotated protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | Unannotated protein; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.488 |
ybeY | yfkJ | GCA_000733925_04530 | GCA_000733925_02862 | Unannotated protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | Unannotated protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.416 |
ybeY | ytnP | GCA_000733925_04530 | GCA_000733925_04493 | Unannotated protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | Unannotated protein. | 0.446 |
yfkJ | ybeY | GCA_000733925_02862 | GCA_000733925_04530 | Unannotated protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Unannotated protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.416 |
yfkJ | ytnP | GCA_000733925_02862 | GCA_000733925_04493 | Unannotated protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Unannotated protein. | 0.447 |
ytnP | GCA_000733925_03921 | GCA_000733925_04493 | GCA_000733925_03921 | Unannotated protein. | Unannotated protein. | 0.576 |
ytnP | GCA_000733925_04492 | GCA_000733925_04493 | GCA_000733925_04492 | Unannotated protein. | Unannotated protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.570 |
ytnP | GCA_000733925_04495 | GCA_000733925_04493 | GCA_000733925_04495 | Unannotated protein. | Unannotated protein. | 0.535 |
ytnP | moeZ | GCA_000733925_04493 | GCA_000733925_02513 | Unannotated protein. | Unannotated protein. | 0.475 |
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