STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000733925_04608Unannotated protein. (1249 aa)    
Predicted Functional Partners:
trpS
Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.584
GCA_000733925_00273
Unannotated protein.
  
 
   0.551
GCA_000733925_01444
Unannotated protein.
  
 
   0.508
GCA_000733925_03302
Unannotated protein.
  
 
   0.504
GCA_000733925_03869
Unannotated protein.
  
     0.487
GCA_000733925_01602
Unannotated protein.
  
 
   0.483
GCA_000733925_04386
Unannotated protein.
  
 
   0.468
GCA_000733925_03868
Unannotated protein.
  
     0.457
GCA_000733925_02052
Unannotated protein.
  
 
   0.447
GCA_000733925_03732
Unannotated protein.
  
 
   0.435
Your Current Organism:
Arenibacter algicola
NCBI taxonomy Id: 616991
Other names: A. algicola, ATCC BAA-2265, Arenibacter sp. TG409, DSM 24761, strain TG409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.