STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000733925_04639Unannotated protein. (977 aa)    
Predicted Functional Partners:
GCA_000733925_02318
Unannotated protein.
     0.716
GCA_000733925_04723
Unannotated protein.
     0.695
GCA_000733925_02041
Unannotated protein.
  
     0.624
GCA_000733925_03295
Unannotated protein.
  
     0.566
GCA_000733925_04373
Unannotated protein.
  
     0.535
GCA_000733925_04415
Unannotated protein.
 
    0.506
GCA_000733925_01676
Unannotated protein.
  
     0.501
GCA_000733925_00783
Unannotated protein.
  
     0.465
GCA_000733925_03235
Unannotated protein.
     0.461
GCA_000733925_02219
Unannotated protein.
  
     0.455
Your Current Organism:
Arenibacter algicola
NCBI taxonomy Id: 616991
Other names: A. algicola, ATCC BAA-2265, Arenibacter sp. TG409, DSM 24761, strain TG409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.